KEGG   PATHWAY: nte04120
Entry
nte04120                    Pathway                                
Name
Ubiquitin mediated proteolysis - Neurospora tetrasperma
Description
Protein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to proteins being degraded is performed by a reaction cascade consisting of three enzymes, named E1 (ubiquitin activating enzyme), E2 (ubiquitin conjugating enzyme), and E3 (ubiquitin ligase). Each E3 has specificity to its substrate, or proteins to be targeted by ubiquitination. Many E3s are discovered in eukaryotes and they are classified into four types: HECT type, U-box type, single RING-finger type, and multi-subunit RING-finger type. Multi-subunit RING-finger E3s are exemplified by cullin-Rbx E3s and APC/C. They consist of a RING-finger-containing subunit (RBX1 or RBX2) that functions to bind E2s, a scaffold-like cullin molecule, adaptor proteins, and a target recognizing subunit that binds substrates.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
nte04120  Ubiquitin mediated proteolysis
nte04120

Other DBs
GO: 0016567
Organism
Neurospora tetrasperma [GN:nte]
Gene
NEUTE1DRAFT69530  NEUTE1DRAFT_69530; polyubiquitin [KO:K08770]
NEUTE1DRAFT27436  NEUTE1DRAFT_27436; ubiquitin [KO:K02927]
NEUTE1DRAFT117720  NEUTE1DRAFT_117720; hypothetical protein [KO:K02977]
NEUTE1DRAFT79528  NEUTE1DRAFT_79528; hypothetical protein [KO:K03178] [EC:6.2.1.45]
NEUTE1DRAFT122516  NEUTE1DRAFT_122516; hypothetical protein [KO:K10684] [EC:6.2.1.45]
NEUTE1DRAFT123449  NEUTE1DRAFT_123449; hypothetical protein [KO:K10685] [EC:6.2.1.45]
NEUTE1DRAFT133618  NEUTE1DRAFT_133618; NEDD8-activating enzyme E1 catalytic subunit [KO:K10686] [EC:6.2.1.64]
NEUTE1DRAFT59944  NEUTE1DRAFT_59944; mus-8 [KO:K10573] [EC:2.3.2.23]
NEUTE1DRAFT117858  NEUTE1DRAFT_117858; hypothetical protein [KO:K06689] [EC:2.3.2.23]
NEUTE1DRAFT61335  NEUTE1DRAFT_61335; ubiquitin-conjugating enzyme E2 15 [KO:K10575] [EC:2.3.2.23]
NEUTE1DRAFT58538  NEUTE1DRAFT_58538; hypothetical protein [KO:K04555] [EC:2.3.2.23]
NEUTE1DRAFT96207  NEUTE1DRAFT_96207; hypothetical protein [KO:K10576] [EC:2.3.2.23]
NEUTE1DRAFT56450  NEUTE1DRAFT_56450; hypothetical protein [KO:K10577]
NEUTE1DRAFT144164  NEUTE1DRAFT_144164; hypothetical protein [KO:K10578] [EC:2.3.2.23]
NEUTE1DRAFT124550  NEUTE1DRAFT_124550; hypothetical protein [KO:K04554] [EC:2.3.2.23]
NEUTE1DRAFT57702  NEUTE1DRAFT_57702; hypothetical protein [KO:K04649] [EC:2.3.2.23]
NEUTE1DRAFT58553  NEUTE1DRAFT_58553; hypothetical protein [KO:K10579] [EC:2.3.2.34]
NEUTE1DRAFT132518  NEUTE1DRAFT_132518; ubiquitin-conjugating enzyme E2 13 [KO:K10580] [EC:2.3.2.23]
NEUTE1DRAFT120006  NEUTE1DRAFT_120006; hypothetical protein [KO:K02207] [EC:2.3.2.23]
NEUTE1DRAFT90783  NEUTE1DRAFT_90783; hypothetical protein [KO:K10688] [EC:2.3.2.23 2.3.2.25]
NEUTE1DRAFT150394  NEUTE1DRAFT_150394; hypothetical protein [KO:K10585] [EC:2.3.2.23]
NEUTE1DRAFT87209  NEUTE1DRAFT_87209; hypothetical protein [KO:K10589] [EC:2.3.2.26]
NEUTE1DRAFT148727  NEUTE1DRAFT_148727; hypothetical protein [KO:K10590] [EC:2.3.2.26]
NEUTE1DRAFT87999  NEUTE1DRAFT_87999; hypothetical protein [KO:K10591] [EC:2.3.2.26]
NEUTE1DRAFT146987  NEUTE1DRAFT_146987; hypothetical protein [KO:K10592] [EC:2.3.2.26]
NEUTE1DRAFT65815  NEUTE1DRAFT_65815; hypothetical protein [KO:K10597] [EC:2.3.2.27]
NEUTE1DRAFT99516  NEUTE1DRAFT_99516; hypothetical protein [KO:K09561] [EC:2.3.2.27]
NEUTE1DRAFT81877  NEUTE1DRAFT_81877; hypothetical protein [KO:K10598] [EC:5.2.1.8]
NEUTE1DRAFT145973  NEUTE1DRAFT_145973; hypothetical protein [KO:K10599] [EC:2.3.2.27]
NEUTE1DRAFT100519  NEUTE1DRAFT_100519; hypothetical protein [KO:K04706] [EC:2.3.2.-]
NEUTE1DRAFT144610  NEUTE1DRAFT_144610; hypothetical protein [KO:K10601] [EC:2.3.2.27]
NEUTE1DRAFT116888  NEUTE1DRAFT_116888; ring-box 1 [KO:K03868] [EC:2.3.2.32]
NEUTE1DRAFT80573  NEUTE1DRAFT_80573; hypothetical protein [KO:K03347]
NEUTE1DRAFT117111  NEUTE1DRAFT_117111; hypothetical protein [KO:K03094]
NEUTE1DRAFT122582  NEUTE1DRAFT_122582; hypothetical protein [KO:K03362]
NEUTE1DRAFT147873  NEUTE1DRAFT_147873; F-box/WD-40 repeat-containing protein [KO:K03362]
NEUTE1DRAFT132169  NEUTE1DRAFT_132169; hypothetical protein [KO:K03361]
NEUTE1DRAFT81186  NEUTE1DRAFT_81186; hypothetical protein [KO:K03361]
NEUTE1DRAFT42617  NEUTE1DRAFT_42617; sulfur controller-2 protein [KO:K10259]
NEUTE1DRAFT98020  NEUTE1DRAFT_98020; hypothetical protein [KO:K03360]
NEUTE1DRAFT44457  NEUTE1DRAFT_44457; hypothetical protein [KO:K03872]
NEUTE1DRAFT133644  NEUTE1DRAFT_133644; hypothetical protein [KO:K03869]
NEUTE1DRAFT146458  NEUTE1DRAFT_146458; hypothetical protein [KO:K10609]
NEUTE1DRAFT145059  NEUTE1DRAFT_145059; hypothetical protein [KO:K10610]
NEUTE1DRAFT120422  NEUTE1DRAFT_120422; hypothetical protein [KO:K10570]
NEUTE1DRAFT28197  NEUTE1DRAFT_28197; hypothetical protein [KO:K03358]
NEUTE1DRAFT74112  NEUTE1DRAFT_74112; hypothetical protein [KO:K03349]
NEUTE1DRAFT91974  NEUTE1DRAFT_91974; WD-repeat-containing protein slp1 [KO:K03363]
NEUTE1DRAFT119929  NEUTE1DRAFT_119929; hypothetical protein [KO:K03364]
NEUTE1DRAFT86821  NEUTE1DRAFT_86821; hypothetical protein [KO:K03348]
NEUTE1DRAFT63265  NEUTE1DRAFT_63265; hypothetical protein [KO:K03350]
NEUTE1DRAFT122482  NEUTE1DRAFT_122482; hypothetical protein [KO:K03351]
NEUTE1DRAFT149499  NEUTE1DRAFT_149499; hypothetical protein [KO:K03352]
NEUTE1DRAFT127519  NEUTE1DRAFT_127519; hypothetical protein [KO:K03353]
NEUTE1DRAFT120018  NEUTE1DRAFT_120018; hypothetical protein [KO:K03355]
NEUTE1DRAFT44798  NEUTE1DRAFT_44798; hypothetical protein [KO:K03357]
Reference
  Authors
Kamura T.
  Title
[Cullin-based E3 family]
  Journal
Tanpakushitsu Kakusan Koso 51:1167-72 (2006)
Reference
  Authors
Matsuda N.
  Title
[Overview: hereditary disorders caused by dysfunction of ubiquitylation]
  Journal
Tanpakushitsu Kakusan Koso 51:1402-7 (2006)
Reference
  Authors
Tokunaga F.
  Title
[E2 ubiquitin-conjugating enzymes: structures and functions]
  Journal
Tanpakushitsu Kakusan Koso 51:1150-6 (2006)
Reference
  Authors
Nalepa G, Rolfe M, Harper JW.
  Title
Drug discovery in the ubiquitin-proteasome system.
  Journal
Nat Rev Drug Discov 5:596-613 (2006)
DOI:10.1038/nrd2056
Reference
  Authors
Hsu YJ, Goodman SR.
  Title
Spectrin and ubiquitination: a review.
  Journal
Cell Mol Biol (Noisy-le-grand) Suppl 51:OL801-7 (2005)
Reference
  Authors
Hatakeyama S, Nakayama KI.
  Title
Ubiquitylation as a quality control system for intracellular proteins.
  Journal
J Biochem 134:1-8 (2003)
DOI:10.1093/jb/mvg106
Reference
  Authors
Lee J, Zhou P.
  Title
DCAFs, the missing link of the CUL4-DDB1 ubiquitin ligase.
  Journal
Mol Cell 26:775-80 (2007)
DOI:10.1016/j.molcel.2007.06.001
Related
pathway
nte03050  Proteasome
KO pathway
ko04120   
LinkDB

DBGET integrated database retrieval system