KEGG   PATHWAY: nti00010
Entry
nti00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Nitrospira tepida
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
nti00010  Glycolysis / Gluconeogenesis
nti00010

Module
nti_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:nti00010]
nti_M00002  Glycolysis, core module involving three-carbon compounds [PATH:nti00010]
nti_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:nti00010]
Other DBs
GO: 0006096 0006094
Organism
Nitrospira tepida [GN:nti]
Gene
DNFV4_00555  Glucokinase [KO:K00845] [EC:2.7.1.2]
DNFV4_02541  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
DNFV4_02538  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
DNFV4_04279  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
DNFV4_03079  fructose-1,6-bisphosphatase 1 [KO:K03841] [EC:3.1.3.11]
DNFV4_03078  Fructose-bisphosphate aldolase class I [KO:K11645] [EC:4.1.2.13]
DNFV4_04280  Fructose-1,6-bisphosphate aldolase/phosphatase [KO:K01622] [EC:4.1.2.13 3.1.3.11]
DNFV4_01380  Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
DNFV4_01382  glyceraldehyde-3-phosphate dehydrogenase A [KO:K00134] [EC:1.2.1.12]
DNFV4_01381  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
DNFV4_00780  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
DNFV4_04104  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
DNFV4_03029  enolase [KO:K01689] [EC:4.2.1.11]
DNFV4_04315  Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
DNFV4_04542  Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
DNFV4_02791  Pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
DNFV4_04268  Pyruvate dehydrogenase E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
DNFV4_04313  Pyruvate dehydrogenase E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
DNFV4_04267  Pyruvate dehydrogenase E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
DNFV4_04314  Pyruvate dehydrogenase E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
DNFV4_04266  Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
DNFV4_04316  Dihydrolipoamide acetyltransferase component (E2) of acetoin dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
DNFV4_02719  Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DNFV4_04269  lipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
DNFV4_01103  2-oxoglutarate:ferredoxin oxidoreductase alpha subunit [KO:K00169] [EC:1.2.7.1]
DNFV4_01265  Pyruvate:ferredoxin oxidoreductase, alpha subunit [KO:K00169] [EC:1.2.7.1]
DNFV4_01099  2-oxoglutarate:ferredoxin oxidoreductase beta subunit [KO:K00170] [EC:1.2.7.1]
DNFV4_01264  Pyruvate:ferredoxin oxidoreductase beta subunit [KO:K00170] [EC:1.2.7.1]
DNFV4_01100  2-oxoglutarate:ferredoxin oxidoreductase gamma subunit [KO:K00172] [EC:1.2.7.1]
DNFV4_01263  Pyruvate:ferredoxin oxidoreductase, gamma subunit [KO:K00172] [EC:1.2.7.1]
DNFV4_01262  Pyruvate:ferredoxin oxidoreductase epsilon subunit [KO:K00171] [EC:1.2.7.1]
DNFV4_04174  putative alcohol dehydrogenase AdhA [KO:K13953] [EC:1.1.1.1]
DNFV4_04627  Zinc-type alcohol dehydrogenase-like protein [KO:K00001] [EC:1.1.1.1]
DNFV4_02804  Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
DNFV4_04312  Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
DNFV4_04003  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
DNFV4_03082  Phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
DNFV4_00026  Polyphosphate glucokinase [KO:K00886] [EC:2.7.1.63]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
nti00020  Citrate cycle (TCA cycle)
nti00030  Pentose phosphate pathway
nti00500  Starch and sucrose metabolism
nti00620  Pyruvate metabolism
nti00640  Propanoate metabolism
nti00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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