KEGG   PATHWAY: ocr00970
Entry
ocr00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Ochrobactrum sp. MT180101
Class
Genetic Information Processing; Translation
Pathway map
ocr00970  Aminoacyl-tRNA biosynthesis
ocr00970

Organism
Ochrobactrum sp. MT180101 [GN:ocr]
Gene
HGK82_12560  tRNA-Ala [KO:K14218]
HGK82_09705  tRNA-Ala [KO:K14218]
HGK82_10860  tRNA-Ala [KO:K14218]
HGK82_14035  tRNA-Ala [KO:K14218]
HGK82_18810  tRNA-Ala [KO:K14218]
HGK82_04845  tRNA-Arg [KO:K14219]
HGK82_00975  tRNA-Arg [KO:K14219]
HGK82_11580  tRNA-Arg [KO:K14219]
HGK82_03275  tRNA-Arg [KO:K14219]
HGK82_20945  tRNA-Asn [KO:K14220]
HGK82_04005  tRNA-Asp [KO:K14221]
HGK82_04010  tRNA-Asp [KO:K14221]
HGK82_20905  tRNA-Cys [KO:K14222]
HGK82_02425  tRNA-Gln [KO:K14223]
HGK82_18090  tRNA-Gln [KO:K14223]
HGK82_09915  tRNA-Glu [KO:K14224]
HGK82_06350  tRNA-Glu [KO:K14224]
HGK82_06355  tRNA-Glu [KO:K14224]
HGK82_06210  tRNA-Gly [KO:K14225]
HGK82_09595  tRNA-Gly [KO:K14225]
HGK82_18900  tRNA-Gly [KO:K14225]
HGK82_05545  tRNA-Gly [KO:K14225]
HGK82_22395  tRNA-His [KO:K14226]
HGK82_09710  tRNA-Ile [KO:K14227]
HGK82_10865  tRNA-Ile [KO:K14227]
HGK82_14040  tRNA-Ile [KO:K14227]
HGK82_18805  tRNA-Ile [KO:K14227]
HGK82_05095  tRNA-Leu [KO:K14228]
HGK82_10995  tRNA-Leu [KO:K14228]
HGK82_09400  tRNA-Leu [KO:K14228]
HGK82_05225  tRNA-Leu [KO:K14228]
HGK82_04495  tRNA-Leu [KO:K14228]
HGK82_07170  tRNA-Lys [KO:K14229]
HGK82_20735  tRNA-Lys [KO:K14229]
HGK82_09690  tRNA-Met [KO:K14230]
HGK82_10845  tRNA-Met [KO:K14230]
HGK82_14020  tRNA-Met [KO:K14230]
HGK82_18825  tRNA-Met [KO:K14230]
HGK82_07970  tRNA-Ile [KO:K14230]
HGK82_08630  tRNA-Met [KO:K14230]
HGK82_00870  tRNA-Phe [KO:K14231]
HGK82_00370  tRNA-Pro [KO:K14232]
HGK82_03635  tRNA-Pro [KO:K14232]
HGK82_03265  tRNA-Pro [KO:K14232]
HGK82_02880  tRNA-Ser [KO:K14233]
HGK82_20560  tRNA-Ser [KO:K14233]
HGK82_10800  tRNA-Ser [KO:K14233]
HGK82_09495  tRNA-Ser [KO:K14233]
HGK82_04665  tRNA-Thr [KO:K14234]
HGK82_13380  tRNA-Thr [KO:K14234]
HGK82_00920  tRNA-Thr [KO:K14234]
HGK82_06200  tRNA-Trp [KO:K14235]
HGK82_06215  tRNA-Tyr [KO:K14236]
HGK82_04805  tRNA-Val [KO:K14237]
HGK82_03805  tRNA-Val [KO:K14237]
HGK82_14605  tRNA-Val [KO:K14237]
HGK82_17435  tRNA-Sec [KO:K14238]
HGK82_05420  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
HGK82_05695  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
HGK82_20795  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
HGK82_02670  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
HGK82_09525  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
HGK82_15590  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
HGK82_04505  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
HGK82_20805  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
HGK82_05970  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
HGK82_03490  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
HGK82_01885  glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
HGK82_01890  glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
HGK82_05130  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
HGK82_04430  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
HGK82_17410  L-seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
HGK82_03055  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
HGK82_05515  methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
HGK82_09310  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
HGK82_04715  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
HGK82_10565  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
HGK82_18285  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
HGK82_22640  lysine--tRNA ligase [KO:K04566] [EC:6.1.1.6]
HGK82_04390  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
HGK82_04115  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
HGK82_18210  histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
HGK82_11995  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
HGK82_12000  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
HGK82_04605  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
HGK82_00130  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
HGK82_13175  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
ocr00250  Alanine, aspartate and glutamate metabolism
ocr00260  Glycine, serine and threonine metabolism
ocr00270  Cysteine and methionine metabolism
ocr00290  Valine, leucine and isoleucine biosynthesis
ocr00300  Lysine biosynthesis
ocr00330  Arginine and proline metabolism
ocr00340  Histidine metabolism
ocr00380  Tryptophan metabolism
ocr00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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