KEGG   PATHWAY: oeu00630
Entry
oeu00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Olea europaea var. sylvestris (wild olive)
Class
Metabolism; Carbohydrate metabolism
Pathway map
oeu00630  Glyoxylate and dicarboxylate metabolism
oeu00630

Module
oeu_M00012  Glyoxylate cycle [PATH:oeu00630]
oeu_M00621  Glycine cleavage system [PATH:oeu00630]
Other DBs
GO: 0046487 0043648
Organism
Olea europaea var. sylvestris (wild olive) [GN:oeu]
Gene
111368506  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
111365394  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal [KO:K01895] [EC:6.2.1.1]
111393404  acetate/butyrate--CoA ligase AAE7, peroxisomal [KO:K01913] [EC:6.2.1.1 6.2.1.2]
111396279  malate synthase, glyoxysomal isoform X1 [KO:K01638] [EC:2.3.3.9]
111393345  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
111410862  malate dehydrogenase, cytoplasmic-like isoform X1 [KO:K00025] [EC:1.1.1.37]
111371598  malate dehydrogenase-like [KO:K00025] [EC:1.1.1.37]
111391600  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
111402546  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
111382988  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
111405257  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
111388346  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
111412447  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
111411968  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
111411969  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
111397232  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
111409457  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
111402344  citrate synthase, mitochondrial-like [KO:K01647] [EC:2.3.3.1]
111370954  citrate synthase, glyoxysomal [KO:K01647] [EC:2.3.3.1]
111386916  citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
111380935  citrate synthase, glyoxysomal-like [KO:K01647] [EC:2.3.3.1]
111383696  citrate synthase, mitochondrial-like [KO:K01647] [EC:2.3.3.1]
111371419  aconitate hydratase 3, mitochondrial-like [KO:K01681] [EC:4.2.1.3]
111395672  aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
111385578  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
111402104  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
111390947  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
111387897  acetyl-CoA acetyltransferase, cytosolic 1-like isoform X1 [KO:K00626] [EC:2.3.1.9]
111375440  peroxisomal (S)-2-hydroxy-acid oxidase-like [KO:K11517] [EC:1.1.3.15]
111395787  peroxisomal (S)-2-hydroxy-acid oxidase [KO:K11517] [EC:1.1.3.15]
111366156  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like [KO:K11517] [EC:1.1.3.15]
111412236  peroxisomal (S)-2-hydroxy-acid oxidase GLO5-like isoform X1 [KO:K11517] [EC:1.1.3.15]
111387410  catalase isozyme 1-like [KO:K03781] [EC:1.11.1.6]
111371766  catalase isozyme 3-like [KO:K03781] [EC:1.11.1.6]
111397533  catalase [KO:K03781] [EC:1.11.1.6]
111394484  catalase isozyme 1 [KO:K03781] [EC:1.11.1.6]
111394485  catalase isozyme 1-like [KO:K03781] [EC:1.11.1.6]
111379042  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
111374942  glyoxylate/hydroxypyruvate reductase HPR3-like isoform X1 [KO:K15919] [EC:1.1.1.79 1.1.1.81]
111393721  glyoxylate/succinic semialdehyde reductase 1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
111406258  glyoxylate/succinic semialdehyde reductase 2, chloroplastic [KO:K18121] [EC:1.1.1.79 1.1.1.-]
111412189  glycerate dehydrogenase HPR, peroxisomal [KO:K15893] [EC:1.1.1.29]
111370693  phosphoglycolate phosphatase 2-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
111370694  phosphoglycolate phosphatase 2-like isoform X1 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
111390908  ribulose bisphosphate carboxylase small chain clone 512-like [KO:K01602] [EC:4.1.1.39]
111406925  ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
111391236  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
111392000  serine--glyoxylate aminotransferase-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
111411900  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
111406319  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
111395357  glutamate--glyoxylate aminotransferase 2-like [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
111404811  glutamate--glyoxylate aminotransferase 2-like [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
111379166  ferredoxin-dependent glutamate synthase, chloroplastic-like [KO:K00284] [EC:1.4.7.1]
111365860  ferredoxin-dependent glutamate synthase, chloroplastic-like [KO:K00284] [EC:1.4.7.1]
111397164  glutamine synthetase cytosolic isozyme 2-like [KO:K01915] [EC:6.3.1.2]
111408686  glutamine synthetase cytosolic isozyme 2-like isoform X1 [KO:K01915] [EC:6.3.1.2]
111371453  glutamine synthetase leaf isozyme, chloroplastic [KO:K01915] [EC:6.3.1.2]
111401204  glutamine synthetase nodule isozyme isoform X1 [KO:K01915] [EC:6.3.1.2]
111392122  glutamine synthetase cytosolic isozyme 1-like [KO:K01915] [EC:6.3.1.2]
111393422  glutamine synthetase leaf isozyme, chloroplastic-like [KO:K01915] [EC:6.3.1.2]
111366370  glutamine synthetase cytosolic isozyme 1-like [KO:K01915] [EC:6.3.1.2]
111381529  LOW QUALITY PROTEIN: serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
111385239  serine hydroxymethyltransferase 3, chloroplastic [KO:K00600] [EC:2.1.2.1]
111390838  serine hydroxymethyltransferase 4 [KO:K00600] [EC:2.1.2.1]
111411787  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
111371711  serine hydroxymethyltransferase, mitochondrial-like [KO:K00600] [EC:2.1.2.1]
111393690  serine hydroxymethyltransferase 2, mitochondrial-like [KO:K00600] [EC:2.1.2.1]
111404354  serine hydroxymethyltransferase 4-like [KO:K00600] [EC:2.1.2.1]
111397761  serine hydroxymethyltransferase 4-like [KO:K00600] [EC:2.1.2.1]
111372617  serine hydroxymethyltransferase 3, chloroplastic-like [KO:K00600] [EC:2.1.2.1]
111383402  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
111409073  serine hydroxymethyltransferase, mitochondrial [KO:K00600] [EC:2.1.2.1]
111373556  glycine dehydrogenase (decarboxylating), mitochondrial [KO:K00281] [EC:1.4.4.2]
111376655  aminomethyltransferase, mitochondrial-like [KO:K00605] [EC:2.1.2.10]
111370689  aminomethyltransferase, mitochondrial-like [KO:K00605] [EC:2.1.2.10]
111402424  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
111397370  dihydrolipoyl dehydrogenase 1, mitochondrial [KO:K00382] [EC:1.8.1.4]
111389678  dihydrolipoyl dehydrogenase 1, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
111376811  dihydrolipoyl dehydrogenase, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
111371034  dihydrolipoyl dehydrogenase 1, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
111379960  dihydrolipoyl dehydrogenase 1, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
111409974  dihydrolipoyl dehydrogenase 2, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
111371329  dihydrolipoyl dehydrogenase 2, chloroplastic-like isoform X1 [KO:K00382] [EC:1.8.1.4]
111407293  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
111368306  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
111366254  D-glycerate 3-kinase, chloroplastic-like [KO:K15918] [EC:2.7.1.31]
111379496  D-glycerate 3-kinase, chloroplastic-like isoform X1 [KO:K15918] [EC:2.7.1.31]
111392352  formate dehydrogenase, mitochondrial [KO:K00122] [EC:1.17.1.9]
111396094  formyltetrahydrofolate deformylase 2, mitochondrial-like isoform X1 [KO:K01433] [EC:3.5.1.10]
111400991  uncharacterized protein LOC111400991 isoform X1 [KO:K01455] [EC:3.5.1.49]
111402130  uncharacterized protein LOC111402130 isoform X1 [KO:K01455] [EC:3.5.1.49]
111390788  oxalate--CoA ligase-like [KO:K22133] [EC:6.2.1.8]
111393217  oxalate--CoA ligase-like [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
oeu00010  Glycolysis / Gluconeogenesis
oeu00020  Citrate cycle (TCA cycle)
oeu00030  Pentose phosphate pathway
oeu00053  Ascorbate and aldarate metabolism
oeu00071  Fatty acid degradation
oeu00230  Purine metabolism
oeu00250  Alanine, aspartate and glutamate metabolism
oeu00260  Glycine, serine and threonine metabolism
oeu00620  Pyruvate metabolism
oeu00710  Carbon fixation in photosynthetic organisms
oeu00750  Vitamin B6 metabolism
oeu00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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