KEGG   PATHWAY: otd00970
Entry
otd00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Ottowia testudinis
Class
Genetic Information Processing; Translation
Pathway map
otd00970  Aminoacyl-tRNA biosynthesis
otd00970

Organism
Ottowia testudinis [GN:otd]
Gene
J1M35_17455  tRNA-Ala [KO:K14218]
J1M35_16040  tRNA-Ala [KO:K14218]
J1M35_17340  tRNA-Ala [KO:K14218]
J1M35_07545  tRNA-Ala [KO:K14218]
J1M35_07125  tRNA-Arg [KO:K14219]
J1M35_19615  tRNA-Arg [KO:K14219]
J1M35_16425  tRNA-Arg [KO:K14219]
J1M35_14205  tRNA-Arg [KO:K14219]
J1M35_11295  tRNA-Asn [KO:K14220]
J1M35_17470  tRNA-Asp [KO:K14221]
J1M35_16030  tRNA-Asp [KO:K14221]
J1M35_14085  tRNA-Cys [KO:K14222]
J1M35_17480  tRNA-Cys [KO:K14222]
J1M35_07065  tRNA-Gln [KO:K14223]
J1M35_16035  tRNA-Glu [KO:K14224]
J1M35_17465  tRNA-Glu [KO:K14224]
J1M35_14090  tRNA-Gly [KO:K14225]
J1M35_14160  tRNA-Gly [KO:K14225]
J1M35_18585  tRNA-Gly [KO:K14225]
J1M35_14520  tRNA-His [KO:K14226]
J1M35_17490  tRNA-His [KO:K14226]
J1M35_17345  tRNA-Ile [KO:K14227]
J1M35_14320  tRNA-Leu [KO:K14228]
J1M35_05835  tRNA-Leu [KO:K14228]
J1M35_07970  tRNA-Leu [KO:K14228]
J1M35_14115  tRNA-Leu [KO:K14228]
J1M35_14080  tRNA-Leu [KO:K14228]
J1M35_17445  tRNA-Leu [KO:K14228]
J1M35_14270  tRNA-Lys [KO:K14229]
J1M35_03070  tRNA-Met [KO:K14230]
J1M35_07120  tRNA-Ile [KO:K14230]
J1M35_04390  tRNA-Met [KO:K14230]
J1M35_18500  tRNA-Phe [KO:K14231]
J1M35_04180  tRNA-Pro [KO:K14232]
J1M35_12510  tRNA-Pro [KO:K14232]
J1M35_14210  tRNA-Pro [KO:K14232]
J1M35_14415  tRNA-Ser [KO:K14233]
J1M35_05180  tRNA-Ser [KO:K14233]
J1M35_11115  tRNA-Ser [KO:K14233]
J1M35_05445  tRNA-Ser [KO:K14233]
J1M35_17450  tRNA-Ser [KO:K14233]
J1M35_15805  tRNA-Thr [KO:K14234]
J1M35_18580  tRNA-Thr [KO:K14234]
J1M35_04105  tRNA-Thr [KO:K14234]
J1M35_18570  tRNA-Trp [KO:K14235]
J1M35_17475  tRNA-Trp [KO:K14235]
J1M35_18590  tRNA-Tyr [KO:K14236]
J1M35_15295  tRNA-Val [KO:K14237]
J1M35_14570  tRNA-Val [KO:K14237]
J1M35_16510  tRNA-Val [KO:K14237]
J1M35_05775  tRNA-Sec [KO:K14238]
J1M35_16045  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
J1M35_06960  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
J1M35_19525  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
J1M35_20385  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
J1M35_19520  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
J1M35_19530  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
J1M35_12865  glutamine--tRNA ligase/YqeY domain fusion protein [KO:K01886] [EC:6.1.1.18]
J1M35_08725  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
J1M35_16895  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
J1M35_20200  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
J1M35_20215  glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
J1M35_12545  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
J1M35_05440  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
J1M35_05790  L-seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
J1M35_05150  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
J1M35_05220  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
J1M35_01485  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
J1M35_14285  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
J1M35_02515  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
J1M35_06125  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
J1M35_11875  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
J1M35_02675  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
J1M35_04220  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
J1M35_15170  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
J1M35_12525  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
J1M35_12520  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
J1M35_03380  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
J1M35_06940  tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
otd00250  Alanine, aspartate and glutamate metabolism
otd00260  Glycine, serine and threonine metabolism
otd00270  Cysteine and methionine metabolism
otd00290  Valine, leucine and isoleucine biosynthesis
otd00300  Lysine biosynthesis
otd00330  Arginine and proline metabolism
otd00340  Histidine metabolism
otd00380  Tryptophan metabolism
otd00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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