KEGG   PATHWAY: pamn00240
Entry
pamn00240                   Pathway                                
Name
Pyrimidine metabolism - Paracoccus aminovorans
Class
Metabolism; Nucleotide metabolism
Pathway map
pamn00240  Pyrimidine metabolism
pamn00240

Module
pamn_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pamn00240]
pamn_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pamn00240]
pamn_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pamn00240]
Other DBs
GO: 0006220 0006213
Organism
Paracoccus aminovorans [GN:pamn]
Gene
JCM7685_1262  carbamoyl-phosphate synthase, large subunit [KO:K01955] [EC:6.3.5.5]
JCM7685_0943  carA; carbamoyl-phosphate synthase, small subunit [KO:K01956] [EC:6.3.5.5]
JCM7685_0415  pyrB; Aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
JCM7685_0417  dihydroorotase [KO:K01465] [EC:3.5.2.3]
JCM7685_1142  pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
JCM7685_1035  pyrD; dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2]
JCM7685_1141  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
JCM7685_0159  pyrF; Orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
JCM7685_1610  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
JCM7685_2012  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
JCM7685_1785  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
JCM7685_1535  septum formation protein Maf [KO:K06287] [EC:3.6.1.-]
JCM7685_1504  pyrG; CTP synthetase [KO:K01937] [EC:6.3.4.2]
JCM7685_1999  cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25]
JCM7685_1037  5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
JCM7685_2969  surE; 5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
JCM7685_0886  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
JCM7685_2225  2',3'-cyclic-nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
JCM7685_1095  metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
JCM7685_0882  cytidine deaminase [KO:K01489] [EC:3.5.4.5]
pAMV3p0140  cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
JCM7685_2049  2'-deoxycytidine 5'-triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
pAMV3p0262  nrdE; Ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
JCM7685_2273  ribonucleoside-diphosphate reductase alpha chain [KO:K00525] [EC:1.17.4.1]
JCM7685_1302  nrdJ; ribonucleoside-diphosphate reductase, subunit alpha [KO:K00525] [EC:1.17.4.1]
pAMV3p0263  nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 [KO:K00526] [EC:1.17.4.1]
JCM7685_0351  hypothetical protein [KO:K06952] [EC:3.1.3.89]
JCM7685_0960  dTMP kinase [KO:K00943] [EC:2.7.4.9]
JCM7685_2093  dut; deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
JCM7685_0883  deoA; thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
JCM7685_2010  tdk; thymidine kinase [KO:K00857] [EC:2.7.1.21]
JCM7685_1957  thyX; FAD-dependent thymidylate synthase [KO:K03465] [EC:2.1.1.148]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
pamn00030  Pentose phosphate pathway
pamn00220  Arginine biosynthesis
pamn00250  Alanine, aspartate and glutamate metabolism
pamn00280  Valine, leucine and isoleucine degradation
pamn00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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