KEGG   PATHWAY: pamo00970
Entry
pamo00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Profundibacter amoris
Class
Genetic Information Processing; Translation
Pathway map
pamo00970  Aminoacyl-tRNA biosynthesis
pamo00970

Organism
Profundibacter amoris [GN:pamo]
Gene
BAR1_13480  tRNA-Ala [KO:K14218]
BAR1_01670  tRNA-Ala [KO:K14218]
BAR1_14485  tRNA-Ala [KO:K14218]
BAR1_02470  tRNA-Ala [KO:K14218]
BAR1_01645  tRNA-Arg [KO:K14219]
BAR1_03120  tRNA-Arg [KO:K14219]
BAR1_09220  tRNA-Arg [KO:K14219]
BAR1_00875  tRNA-Arg [KO:K14219]
BAR1_09325  tRNA-Asn [KO:K14220]
BAR1_12870  tRNA-Asn [KO:K14220]
BAR1_10265  tRNA-Asp [KO:K14221]
BAR1_13840  tRNA-Cys [KO:K14222]
BAR1_02670  tRNA-Gln [KO:K14223]
BAR1_10690  tRNA-Glu [KO:K14224]
BAR1_10390  tRNA-Gly [KO:K14225]
BAR1_07415  tRNA-Gly [KO:K14225]
BAR1_03425  tRNA-Gly [KO:K14225]
BAR1_05015  tRNA-His [KO:K14226]
BAR1_01665  tRNA-Ile [KO:K14227]
BAR1_02465  tRNA-Ile [KO:K14227]
BAR1_04050  tRNA-Leu [KO:K14228]
BAR1_06285  tRNA-Leu [KO:K14228]
BAR1_13965  tRNA-Leu [KO:K14228]
BAR1_08655  tRNA-Leu [KO:K14228]
BAR1_01875  tRNA-Leu [KO:K14228]
BAR1_01165  tRNA-Lys [KO:K14229]
BAR1_01685  tRNA-Met [KO:K14230]
BAR1_02485  tRNA-Met [KO:K14230]
BAR1_06635  tRNA-Met [KO:K14230]
BAR1_16820  tRNA-Met [KO:K14230]
BAR1_11340  tRNA-Phe [KO:K14231]
BAR1_09570  tRNA-Pro [KO:K14232]
BAR1_00355  tRNA-Pro [KO:K14232]
BAR1_09815  tRNA-Pro [KO:K14232]
BAR1_12515  tRNA-Ser [KO:K14233]
BAR1_13960  tRNA-Ser [KO:K14233]
BAR1_06895  tRNA-Ser [KO:K14233]
BAR1_07590  tRNA-Ser [KO:K14233]
BAR1_07755  tRNA-Ser [KO:K14233]
BAR1_04565  tRNA-Thr [KO:K14234]
BAR1_04395  tRNA-Thr [KO:K14234]
BAR1_17580  tRNA-Thr [KO:K14234]
BAR1_16800  tRNA-Trp [KO:K14235]
BAR1_10270  tRNA-Val [KO:K14237]
BAR1_02380  tRNA-Val [KO:K14237]
BAR1_09940  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
BAR1_02760  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
BAR1_04645  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
BAR1_14740  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
BAR1_05590  Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
BAR1_04640  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
BAR1_06600  alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
BAR1_02780  aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
BAR1_13520  glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
BAR1_13530  glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
BAR1_11755  threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
BAR1_06075  serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
BAR1_07310  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
BAR1_10965  methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
BAR1_16350  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
BAR1_03975  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
BAR1_14800  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
BAR1_11625  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
BAR1_03065  lysine--tRNA ligase [KO:K04566] [EC:6.1.1.6]
BAR1_09605  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
BAR1_11005  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
BAR1_12930  histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
BAR1_02170  phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
BAR1_02185  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
BAR1_06455  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
BAR1_15015  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
pamo00250  Alanine, aspartate and glutamate metabolism
pamo00260  Glycine, serine and threonine metabolism
pamo00270  Cysteine and methionine metabolism
pamo00290  Valine, leucine and isoleucine biosynthesis
pamo00300  Lysine biosynthesis
pamo00330  Arginine and proline metabolism
pamo00340  Histidine metabolism
pamo00380  Tryptophan metabolism
pamo00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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