KEGG   PATHWAY: paru00970
Entry
paru00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Paracoccus jeotgali
Class
Genetic Information Processing; Translation
Pathway map
paru00970  Aminoacyl-tRNA biosynthesis
paru00970

Organism
Paracoccus jeotgali [GN:paru]
Gene
CYR75_14155  tRNA-Ala [KO:K14218]
CYR75_09545  tRNA-Ala [KO:K14218]
CYR75_07765  tRNA-Ala [KO:K14218]
CYR75_00220  tRNA-Ala [KO:K14218]
CYR75_04725  tRNA-Arg [KO:K14219]
CYR75_07825  tRNA-Arg [KO:K14219]
CYR75_11460  tRNA-Arg [KO:K14219]
CYR75_00095  tRNA-Arg [KO:K14219]
CYR75_08230  tRNA-Asn [KO:K14220]
CYR75_03165  tRNA-Asp [KO:K14221]
CYR75_03170  tRNA-Asp [KO:K14221]
CYR75_03205  tRNA-Cys [KO:K14222]
CYR75_05690  tRNA-Gln [KO:K14223]
CYR75_02530  tRNA-Glu [KO:K14224]
CYR75_03840  tRNA-Gly [KO:K14225]
CYR75_02230  tRNA-Gly [KO:K14225]
CYR75_01440  tRNA-Gly [KO:K14225]
CYR75_05440  tRNA-His [KO:K14226]
CYR75_14150  tRNA-Ile [KO:K14227]
CYR75_00215  tRNA-Ile [KO:K14227]
CYR75_01360  tRNA-Leu [KO:K14228]
CYR75_06210  tRNA-Leu [KO:K14228]
CYR75_09400  tRNA-Leu [KO:K14228]
CYR75_10660  tRNA-Leu [KO:K14228]
CYR75_11455  tRNA-Leu [KO:K14228]
CYR75_04770  tRNA-Lys [KO:K14229]
CYR75_09315  tRNA-Met [KO:K14230]
CYR75_00235  tRNA-Met [KO:K14230]
CYR75_03385  tRNA-Met [KO:K14230]
CYR75_14170  tRNA-Met [KO:K14230]
CYR75_10480  tRNA-Phe [KO:K14231]
CYR75_07075  tRNA-Pro [KO:K14232]
CYR75_07710  tRNA-Pro [KO:K14232]
CYR75_01160  tRNA-Pro [KO:K14232]
CYR75_05315  tRNA-Ser [KO:K14233]
CYR75_04030  tRNA-Ser [KO:K14233]
CYR75_06475  tRNA-Ser [KO:K14233]
CYR75_06755  tRNA-Ser [KO:K14233]
CYR75_03380  tRNA-Thr [KO:K14234]
CYR75_09540  tRNA-Thr [KO:K14234]
CYR75_09750  tRNA-Thr [KO:K14234]
CYR75_02085  tRNA-Trp [KO:K14235]
CYR75_09810  tRNA-Tyr [KO:K14236]
CYR75_13950  tRNA-Val [KO:K14237]
CYR75_02140  tRNA-Val [KO:K14237]
CYR75_06445  tRNA-Val [KO:K14237]
CYR75_07010  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
CYR75_09320  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
CYR75_07355  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
CYR75_12325  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
CYR75_03705  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
CYR75_07360  Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
CYR75_07880  alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
CYR75_09510  aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
CYR75_07895  glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
CYR75_07885  glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
CYR75_08750  threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
CYR75_00645  serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
CYR75_06305  selA; L-seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
CYR75_05385  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
CYR75_10725  methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
CYR75_01445  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
CYR75_10015  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
CYR75_10980  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
CYR75_01640  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
CYR75_05830  lysine--tRNA ligase [KO:K04566] [EC:6.1.1.6]
CYR75_07745  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
CYR75_04920  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
CYR75_04935  histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
CYR75_10685  phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
CYR75_10075  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
CYR75_03155  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
CYR75_00175  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
paru00250  Alanine, aspartate and glutamate metabolism
paru00260  Glycine, serine and threonine metabolism
paru00270  Cysteine and methionine metabolism
paru00290  Valine, leucine and isoleucine biosynthesis
paru00300  Lysine biosynthesis
paru00330  Arginine and proline metabolism
paru00340  Histidine metabolism
paru00380  Tryptophan metabolism
paru00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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