KEGG   PATHWAY: pbor00010
Entry
pbor00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Paludisphaera borealis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pbor00010  Glycolysis / Gluconeogenesis
pbor00010

Module
pbor_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pbor00010]
pbor_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pbor00010]
pbor_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pbor00010]
pbor_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pbor00010]
Other DBs
GO: 0006096 0006094
Organism
Paludisphaera borealis [GN:pbor]
Gene
BSF38_00126  glcK_1; Glucokinase [KO:K25026] [EC:2.7.1.2]
BSF38_05599  glcK_3; Glucokinase [KO:K25026] [EC:2.7.1.2]
BSF38_01764  glcK_2; Glucokinase [KO:K25026] [EC:2.7.1.2]
BSF38_00695  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
BSF38_01466  pfkA; ATP-dependent 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
BSF38_00104  pfp_1; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
BSF38_05187  pfp_3; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
BSF38_01802  pfp_2; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
BSF38_02048  glpX; Fructose-1,6-bisphosphatase class 2 [KO:K02446] [EC:3.1.3.11]
BSF38_02962  fbaB; Fructose-bisphosphate aldolase class 1 [KO:K11645] [EC:4.1.2.13]
BSF38_00802  fbaA; putative fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
BSF38_04191  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
BSF38_01332  gap; Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
BSF38_01333  pgk_tpi; Bifunctional PGK/TIM [KO:K00927] [EC:2.7.2.3]
BSF38_10033  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
BSF38_04183  pspA_2; Phosphoserine phosphatase 1 [KO:K15634] [EC:5.4.2.11]
BSF38_00879  hypothetical protein [KO:K15635] [EC:5.4.2.12]
BSF38_05014  eno2_2; Enolase 2 [KO:K01689] [EC:4.2.1.11]
BSF38_03587  eno2_1; Enolase 2 [KO:K01689] [EC:4.2.1.11]
BSF38_03681  pyk; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
BSF38_01695  ppdK; Pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
BSF38_02013  ppsA; Phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
BSF38_05555  acoA_2; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [KO:K00161] [EC:1.2.4.1]
BSF38_05554  bfmBAB_2; 2-oxoisovalerate dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
BSF38_00803  pdhC_1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
BSF38_05553  pdhC_2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
BSF38_05552  lpd3_2; Dihydrolipoyl dehydrogenase 3 [KO:K00382] [EC:1.8.1.4]
BSF38_04416  lpd3_1; Dihydrolipoyl dehydrogenase 3 [KO:K00382] [EC:1.8.1.4]
BSF38_00498  korA; 2-oxoglutarate oxidoreductase subunit KorA [KO:K00174] [EC:1.2.7.3 1.2.7.11]
BSF38_00499  korB; 2-oxoglutarate oxidoreductase subunit KorB [KO:K00175] [EC:1.2.7.3 1.2.7.11]
BSF38_04535  ldh; L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
BSF38_02030  adhA; putative alcohol dehydrogenase AdhA [KO:K13953] [EC:1.1.1.1]
BSF38_05709  adhC2; NADP-dependent alcohol dehydrogenase C 2 [KO:K13979] [EC:1.1.1.2]
BSF38_00050  styD; Phenylacetaldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
BSF38_04840  acsA; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
BSF38_05049  acs; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
BSF38_02024  sucD_1; Succinyl-CoA ligase [ADP-forming] subunit alpha [KO:K24012] [EC:6.2.1.13]
BSF38_02022  Acetyltransferase Pat [KO:K24012] [EC:6.2.1.13]
BSF38_03779  galM; Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
BSF38_04405  mro; Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
BSF38_01789  yihX; Alpha-D-glucose 1-phosphate phosphatase YihX [KO:K20866] [EC:3.1.3.10]
BSF38_05507  pgcA; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
BSF38_01882  pckA; Phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pbor00020  Citrate cycle (TCA cycle)
pbor00030  Pentose phosphate pathway
pbor00500  Starch and sucrose metabolism
pbor00620  Pyruvate metabolism
pbor00640  Propanoate metabolism
pbor00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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