KEGG   PATHWAY: pchl00630
Entry
pchl00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Stutzerimonas chloritidismutans
Class
Metabolism; Carbohydrate metabolism
Pathway map
pchl00630  Glyoxylate and dicarboxylate metabolism
pchl00630

Module
pchl_M00621  Glycine cleavage system [PATH:pchl00630]
Other DBs
GO: 0046487 0043648
Organism
Stutzerimonas chloritidismutans [GN:pchl]
Gene
LLJ08_09705  isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
LLJ08_12740  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
LLJ08_18440  malate synthase G [KO:K01638] [EC:2.3.3.9]
LLJ08_01805  malate synthase G [KO:K01638] [EC:2.3.3.9]
LLJ08_11965  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
LLJ08_11080  prpC; 2-methylcitrate synthase [KO:K01659] [EC:2.3.3.5]
LLJ08_12085  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
LLJ08_11025  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
LLJ08_04560  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LLJ08_11725  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
LLJ08_05835  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
LLJ08_18460  glcD; glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
LLJ08_18455  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
LLJ08_18450  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
LLJ08_17150  catalase [KO:K03781] [EC:1.11.1.6]
LLJ08_20675  katE; catalase HPII [KO:K03781] [EC:1.11.1.6]
LLJ08_13615  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
LLJ08_15600  2-hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
LLJ08_17510  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
LLJ08_07445  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
LLJ08_18855  glnA; glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
LLJ08_20530  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
LLJ08_20540  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
LLJ08_11305  glnT; type III glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
LLJ08_16485  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
LLJ08_00935  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
LLJ08_00925  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
LLJ08_11930  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LLJ08_19695  glycine cleavage system protein H [KO:K02437]
LLJ08_00930  gcvH; glycine cleavage system protein GcvH [KO:K02437]
LLJ08_05040  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
LLJ08_05035  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
LLJ08_05790  TIM barrel protein [KO:K01816] [EC:5.3.1.22]
LLJ08_05030  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
LLJ08_05025  glycerate kinase [KO:K11529] [EC:2.7.1.165]
LLJ08_09450  aldA; aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
LLJ08_07270  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
LLJ08_09625  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
LLJ08_19605  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
LLJ08_19610  fdxH; formate dehydrogenase subunit beta [KO:K00124]
LLJ08_19615  formate dehydrogenase subunit gamma [KO:K00127]
LLJ08_15375  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
LLJ08_14090  acetamidase/formamidase family protein [KO:K01455] [EC:3.5.1.49]
LLJ08_19430  AMP-binding protein [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
pchl00010  Glycolysis / Gluconeogenesis
pchl00020  Citrate cycle (TCA cycle)
pchl00030  Pentose phosphate pathway
pchl00053  Ascorbate and aldarate metabolism
pchl00071  Fatty acid degradation
pchl00230  Purine metabolism
pchl00250  Alanine, aspartate and glutamate metabolism
pchl00260  Glycine, serine and threonine metabolism
pchl00620  Pyruvate metabolism
pchl00710  Carbon fixation by Calvin cycle
pchl00750  Vitamin B6 metabolism
pchl00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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