KEGG   PATHWAY: pcl00010
Entry
pcl00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Pyrobaculum calidifontis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pcl00010  Glycolysis / Gluconeogenesis
pcl00010

Module
pcl_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pcl00010]
pcl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pcl00010]
Other DBs
GO: 0006096 0006094
Organism
Pyrobaculum calidifontis [GN:pcl]
Gene
Pcal_1032  glucokinase [KO:K25026] [EC:2.7.1.2]
Pcal_0606  bifunctional phosphoglucose/phosphomannose isomerase [KO:K15916] [EC:5.3.1.9 5.3.1.8]
Pcal_0111  fructose-bisphosphate aldolase [KO:K01622] [EC:4.1.2.13 3.1.3.11]
Pcal_0817  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Pcal_0632  glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
Pcal_0633  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Pcal_1668  phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
Pcal_0022  enolase [KO:K01689] [EC:4.2.1.11]
Pcal_0029  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Pcal_0162  pyruvate phosphate dikinase [KO:K01006] [EC:2.7.9.1]
Pcal_0313  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
Pcal_1405  Pyruvate dehydrogenase (acetyl-transferring) [KO:K00161] [EC:1.2.4.1]
Pcal_1404  Transketolase, central region [KO:K00162] [EC:1.2.4.1]
Pcal_1403  catalytic domain of components of various dehydrogenase complexes [KO:K00627] [EC:2.3.1.12]
Pcal_1402  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Pcal_0667  pyruvate ferredoxin oxidoreductase, alpha subunit [KO:K00169] [EC:1.2.7.1]
Pcal_1769  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00169] [EC:1.2.7.1]
Pcal_2051  pyruvate ferredoxin oxidoreductase, alpha subunit [KO:K00169] [EC:1.2.7.1]
Pcal_2050  pyruvate ferredoxin oxidoreductase, beta subunit [KO:K00170] [EC:1.2.7.1]
Pcal_0668  pyruvate ferredoxin oxidoreductase, beta subunit [KO:K00170] [EC:1.2.7.1]
Pcal_1770  thiamine pyrophosphate enzyme domain protein TPP-binding protein [KO:K00170] [EC:1.2.7.1]
Pcal_2052  pyruvate ferredoxin oxidoreductase, gamma subunit / pyruvate ferredoxin oxidoreductase, delta subunit [KO:K00172] [EC:1.2.7.1]
Pcal_0665  pyruvate/ketoisovalerate oxidoreductase, gamma subunit [KO:K00172] [EC:1.2.7.1]
Pcal_1767  pyruvate/ketoisovalerate oxidoreductase, gamma subunit [KO:K00172] [EC:1.2.7.1]
Pcal_1768  pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [KO:K00171] [EC:1.2.7.1]
Pcal_0666  pyruvate ferredoxin oxidoreductase, delta subunit [KO:K00171] [EC:1.2.7.1]
Pcal_0561  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Pcal_0108  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Pcal_0107  pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Pcal_0560  pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Pcal_1311  Alcohol dehydrogenase GroES domain protein [KO:K13953] [EC:1.1.1.1]
Pcal_0166  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
Pcal_0380  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
Pcal_1562  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
Pcal_1854  CoA-binding domain protein [KO:K01905] [EC:6.2.1.13]
Pcal_1855  ATP-grasp domain protein [KO:K22224] [EC:6.2.1.13]
Pcal_0664  glyceraldehyde-3-phosphate ferredoxin oxidoreductase [KO:K11389] [EC:1.2.7.6]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pcl00020  Citrate cycle (TCA cycle)
pcl00030  Pentose phosphate pathway
pcl00500  Starch and sucrose metabolism
pcl00620  Pyruvate metabolism
pcl00640  Propanoate metabolism
pcl00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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