KEGG   PATHWAY: pcoo03440
Entry
pcoo03440                   Pathway                                
Name
Homologous recombination - Puma concolor (puma)
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
pcoo03440  Homologous recombination
pcoo03440

Other DBs
GO: 0000724
Organism
Puma concolor (puma) [GN:pcoo]
Gene
112866795  SSBP1; single-stranded DNA-binding protein, mitochondrial [KO:K03111]
112860680  RAD50; DNA repair protein RAD50 [KO:K10866] [EC:3.6.-.-]
112865780  MRE11; double-strand break repair protein MRE11 [KO:K10865]
112859757  NBN; LOW QUALITY PROTEIN: nibrin [KO:K10867]
112866135  ATM; serine-protein kinase ATM isoform X1 [KO:K04728] [EC:2.7.11.1]
112854200  BRCA1; breast cancer type 1 susceptibility protein isoform X1 [KO:K10605] [EC:2.3.2.27]
112866876  BARD1; BRCA1-associated RING domain protein 1 [KO:K10683]
112868322  RBBP8; DNA endonuclease RBBP8 [KO:K20773] [EC:3.1.-.-]
112855443  BRIP1; LOW QUALITY PROTEIN: Fanconi anemia group J protein [KO:K15362] [EC:5.6.2.3]
112849647  TOPBP1; DNA topoisomerase 2-binding protein 1 isoform X1 [KO:K10728]
112858347  ABRAXAS1; LOW QUALITY PROTEIN: BRCA1-A complex subunit Abraxas 1 [KO:K20774]
112861004  UIMC1; BRCA1-A complex subunit RAP80 [KO:K20775]
112852607  BABAM1; BRISC and BRCA1-A complex member 1 [KO:K20776]
112864052  BABAM2; BRISC and BRCA1-A complex member 2 isoform X1 [KO:K12173]
112870942  BRCC3; lys-63-specific deubiquitinase BRCC36 isoform X1 [KO:K11864] [EC:3.4.19.-]
112853320  PALB2; partner and localizer of BRCA2 [KO:K10897]
112860373  BRCA2; breast cancer type 2 susceptibility protein [KO:K08775]
112862736  SEM1; 26S proteasome complex subunit SEM1 [KO:K10881]
112863242  SYCP3; synaptonemal complex protein 3 [KO:K19528]
112853945  synaptonemal complex protein 3-like [KO:K19528]
112853065  RPA1; LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit [KO:K07466]
112870788  RPA2; replication protein A 32 kDa subunit [KO:K10739]
112866727  RPA3; replication protein A 14 kDa subunit [KO:K10740]
112855399  RAD51; DNA repair protein RAD51 homolog 1 isoform X1 [KO:K04482]
112867548  RAD52; DNA repair protein RAD52 homolog [KO:K10873]
112856208  RAD51B; DNA repair protein RAD51 homolog 2 [KO:K10869]
112853834  RAD51C; DNA repair protein RAD51 homolog 3 [KO:K10870]
112853867  RAD51D; DNA repair protein RAD51 homolog 4 [KO:K10871]
112866518  XRCC2; DNA repair protein XRCC2 [KO:K10879]
112863551  RAD54L; DNA repair and recombination protein RAD54-like [KO:K10875] [EC:5.6.2.-]
112859473  RAD54B; DNA repair and recombination protein RAD54B [KO:K10877] [EC:5.6.2.-]
112850826  POLD1; DNA polymerase delta catalytic subunit [KO:K02327] [EC:2.7.7.7]
112860032  POLD2; DNA polymerase delta subunit 2 [KO:K02328]
112865020  POLD3; DNA polymerase delta subunit 3 [KO:K03504]
112852016  POLD4; DNA polymerase delta subunit 4 isoform X1 [KO:K03505]
112855307  BLM; Bloom syndrome protein isoform X1 [KO:K10901] [EC:5.6.2.4]
112857079  TOP3A; DNA topoisomerase 3-alpha [KO:K03165] [EC:5.6.2.1]
112870179  TOP3B; DNA topoisomerase 3-beta-1 [KO:K03165] [EC:5.6.2.1]
112851946  MUS81; crossover junction endonuclease MUS81 [KO:K08991] [EC:3.1.22.-]
112854073  EME1; crossover junction endonuclease EME1 [KO:K10882] [EC:3.1.22.-]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
LinkDB

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