KEGG   PATHWAY: pcv00240
Entry
pcv00240                    Pathway                                
Name
Pyrimidine metabolism - Pectobacterium odoriferum
Class
Metabolism; Nucleotide metabolism
Pathway map
pcv00240  Pyrimidine metabolism
pcv00240

Module
pcv_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:pcv00240]
pcv_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pcv00240]
pcv_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pcv00240]
pcv_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pcv00240]
Other DBs
GO: 0006220 0006213
Organism
Pectobacterium odoriferum [GN:pcv]
Gene
BCS7_18255  carB; carbamoyl phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
BCS7_18260  carbamoyl phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
BCS7_01950  aspartate carbamoyltransferase catalytic subunit [KO:K00609] [EC:2.1.3.2]
BCS7_01945  aspartate carbamoyltransferase regulatory subunit [KO:K00610]
BCS7_12600  dihydroorotase [KO:K01465] [EC:3.5.2.3]
BCS7_01675  hypothetical protein [KO:K00254] [EC:1.3.5.2]
BCS7_08950  dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2]
BCS7_00520  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
BCS7_01680  hypothetical protein [KO:K00762] [EC:2.4.2.10]
BCS7_11885  orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
BCS7_05010  uridylate kinase [KO:K09903] [EC:2.7.4.22]
BCS7_15295  nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
BCS7_17070  mazG; nucleoside triphosphate hydrolase [KO:K04765] [EC:3.6.1.9]
BCS7_01335  septum formation inhibitor Maf [KO:K06287] [EC:3.6.1.-]
BCS7_17565  metal-dependent hydrolase [KO:K07043] [EC:3.6.1.-]
BCS7_17065  pyrG; CTP synthetase [KO:K01937] [EC:6.3.4.2]
BCS7_08680  cytidylate kinase [KO:K00945] [EC:2.7.4.25]
BCS7_06615  uridine kinase [KO:K00876] [EC:2.7.1.48]
BCS7_05640  ushA; 5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
BCS7_00725  uridine phosphorylase [KO:K00757] [EC:2.4.2.3]
BCS7_05245  hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
BCS7_05845  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
BCS7_00070  2', 3'-cyclic nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
BCS7_17255  cpdB; 2', 3'-cyclic nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
BCS7_04950  LOG family protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
BCS7_07520  cytidine deaminase [KO:K01489] [EC:3.5.4.5]
BCS7_01915  ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
BCS7_06620  deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
BCS7_15885  ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
BCS7_05720  ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
BCS7_05715  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
BCS7_15890  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
BCS7_14170  5'-nucleotidase [KO:K08722] [EC:3.1.3.89]
BCS7_12525  thymidylate kinase [KO:K00943] [EC:2.7.4.9]
BCS7_00530  deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
BCS7_03075  thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
BCS7_10230  thymidine kinase [KO:K00857] [EC:2.7.1.21]
BCS7_04795  thymidylate synthase [KO:K00560] [EC:2.1.1.45]
BCS7_10920  FMN reductase [KO:K09024] [EC:1.5.1.-]
BCS7_10545  malonic semialdehyde reductase [KO:K16066] [EC:1.1.1.381 1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
pcv00030  Pentose phosphate pathway
pcv00220  Arginine biosynthesis
pcv00250  Alanine, aspartate and glutamate metabolism
pcv00280  Valine, leucine and isoleucine degradation
pcv00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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