KEGG   PATHWAY: pdh00010
Entry
pdh00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Paenibacillus donghaensis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pdh00010  Glycolysis / Gluconeogenesis
pdh00010

Module
pdh_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pdh00010]
pdh_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pdh00010]
pdh_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pdh00010]
Other DBs
GO: 0006096 0006094
Organism
Paenibacillus donghaensis [GN:pdh]
Gene
B9T62_22545  transcriptional regulator [KO:K25026] [EC:2.7.1.2]
B9T62_11390  glucokinase [KO:K25026] [EC:2.7.1.2]
B9T62_02260  transcriptional regulator [KO:K25026] [EC:2.7.1.2]
B9T62_32955  glucokinase [KO:K25026] [EC:2.7.1.2]
B9T62_01330  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
B9T62_07485  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
B9T62_00080  glpX; fructose-bisphosphatase class II [KO:K02446] [EC:3.1.3.11]
B9T62_05750  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
B9T62_32685  fba; fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
B9T62_33020  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
B9T62_17695  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
B9T62_33010  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
B9T62_33015  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
B9T62_25945  gpmA; phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
B9T62_08450  histidine phosphatase family protein [KO:K01834] [EC:5.4.2.11]
B9T62_00355  histidine phosphatase family protein [KO:K01834] [EC:5.4.2.11]
B9T62_00200  histidine phosphatase family protein [KO:K15634] [EC:5.4.2.11]
B9T62_33025  phosphoglycerate mutase (2,3-diphosphoglycerate-independent) [KO:K15633] [EC:5.4.2.12]
B9T62_33030  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
B9T62_05755  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
B9T62_02770  hypothetical protein [KO:K00873] [EC:2.7.1.40]
B9T62_05505  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
B9T62_08575  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
B9T62_14520  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
B9T62_14515  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
B9T62_14510  dienelactone hydrolase [KO:K00627] [EC:2.3.1.12]
B9T62_21090  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
B9T62_14505  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
B9T62_15945  pyruvate synthase [KO:K00169] [EC:1.2.7.1]
B9T62_15950  ferredoxin [KO:K00172] [EC:1.2.7.1]
B9T62_34165  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
B9T62_13900  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
B9T62_21575  bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
B9T62_02795  alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
B9T62_30255  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
B9T62_37110  acyl--CoA ligase [KO:K01895] [EC:6.2.1.1]
B9T62_26370  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
B9T62_09940  aldose epimerase [KO:K01785] [EC:5.1.3.3]
B9T62_29455  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
B9T62_05965  6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
B9T62_02605  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
B9T62_22375  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
B9T62_08020  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
B9T62_12675  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
B9T62_06455  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
B9T62_34140  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
B9T62_02495  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
B9T62_04520  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
B9T62_02615  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
B9T62_03745  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
B9T62_04780  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
B9T62_03700  PTS glucose transporter subunit IICBA [KO:K20118] [EC:2.7.1.199]
B9T62_09545  PTS glucose transporter subunit IIA [KO:K20118] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pdh00020  Citrate cycle (TCA cycle)
pdh00030  Pentose phosphate pathway
pdh00500  Starch and sucrose metabolism
pdh00620  Pyruvate metabolism
pdh00640  Propanoate metabolism
pdh00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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