KEGG   PATHWAY: pdul00710
Entry
pdul00710                   Pathway                                
Name
Carbon fixation by Calvin cycle - Prunus dulcis (almond)
Class
Metabolism; Energy metabolism
Pathway map
pdul00710  Carbon fixation by Calvin cycle
pdul00710

Module
pdul_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:pdul00710]
pdul_M00168  CAM (Crassulacean acid metabolism), dark [PATH:pdul00710]
pdul_M00169  CAM (Crassulacean acid metabolism), light [PATH:pdul00710]
pdul_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:pdul00710]
pdul_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:pdul00710]
pdul_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:pdul00710]
Organism
Prunus dulcis (almond) [GN:pdul]
Gene
117635816  ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
32882954  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
117623153  ribulose bisphosphate carboxylase small chain, chloroplastic [KO:K01602] [EC:4.1.1.39]
117635254  ribulose bisphosphate carboxylase small chain clone 512-like [KO:K01602] [EC:4.1.1.39]
117625684  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
117630128  phosphoglycerate kinase-like isoform X1 [KO:K00927] [EC:2.7.2.3]
117624064  phosphoglycerate kinase 3, cytosolic [KO:K00927] [EC:2.7.2.3]
117618808  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
117624175  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic-like [KO:K00134] [EC:1.2.1.12]
117627715  glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like [KO:K00134] [EC:1.2.1.12]
117612470  glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic [KO:K05298] [EC:1.2.1.13]
117627459  glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic [KO:K05298] [EC:1.2.1.13]
117629903  fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [KO:K01623] [EC:4.1.2.13]
117633002  fructose-bisphosphate aldolase 1, cytoplasmic-like [KO:K01623] [EC:4.1.2.13]
117633664  fructose-bisphosphate aldolase 1, cytoplasmic isoform X1 [KO:K01623] [EC:4.1.2.13]
117633665  fructose-bisphosphate aldolase, cytoplasmic isozyme [KO:K01623] [EC:4.1.2.13]
117633725  fructose-bisphosphate aldolase 1, chloroplastic-like isoform X1 [KO:K01623] [EC:4.1.2.13]
117626235  fructose-bisphosphate aldolase 3, chloroplastic [KO:K01623] [EC:4.1.2.13]
117636924  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
117631386  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
117636417  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
117636689  fructose-1,6-bisphosphatase, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
117636691  fructose-1,6-bisphosphatase, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
117617441  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
117618675  sedoheptulose-1,7-bisphosphatase, chloroplastic-like [KO:K01100] [EC:3.1.3.37]
117624830  sedoheptulose-1,7-bisphosphatase, chloroplastic-like [KO:K01100] [EC:3.1.3.37]
117633189  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
117624366  probable ribose-5-phosphate isomerase 4, chloroplastic [KO:K01807] [EC:5.3.1.6]
117636482  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
117628536  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
117617318  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
117633080  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
117636546  triosephosphate isomerase, chloroplastic [KO:K01803] [EC:5.3.1.1]
117629189  ribulose-phosphate 3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
117623405  ribulose-phosphate 3-epimerase, cytoplasmic isoform [KO:K01783] [EC:5.1.3.1]
117625274  transaldolase [KO:K00616] [EC:2.2.1.2]
117627244  transaldolase isoform X1 [KO:K00616] [EC:2.2.1.2]
117621199  phosphoenolpyruvate carboxylase 2 [KO:K01595] [EC:4.1.1.31]
117621224  phosphoenolpyruvate carboxylase 2 [KO:K01595] [EC:4.1.1.31]
117626410  phosphoenolpyruvate carboxylase, housekeeping isozyme [KO:K01595] [EC:4.1.1.31]
117614974  phosphoenolpyruvate carboxylase 4 [KO:K01595] [EC:4.1.1.31]
117632986  aspartate aminotransferase, cytoplasmic [KO:K14454] [EC:2.6.1.1]
117632995  aspartate aminotransferase, cytoplasmic-like isoform X1 [KO:K14454] [EC:2.6.1.1]
117630836  phosphoenolpyruvate carboxykinase (ATP)-like isoform X1 [KO:K01610] [EC:4.1.1.49]
117630837  phosphoenolpyruvate carboxykinase (ATP)-like [KO:K01610] [EC:4.1.1.49]
117615036  phosphoenolpyruvate carboxykinase (ATP)-like [KO:K01610] [EC:4.1.1.49]
117621466  alanine aminotransferase 2, mitochondrial-like [KO:K00814] [EC:2.6.1.2]
117624640  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
117613909  pyruvate, phosphate dikinase, chloroplastic [KO:K01006] [EC:2.7.9.1]
117622154  LOW QUALITY PROTEIN: NADP-dependent malic enzyme [KO:K00029] [EC:1.1.1.40]
117634928  NADP-dependent malic enzyme isoform X1 [KO:K00029] [EC:1.1.1.40]
117615861  NADP-dependent malic enzyme-like [KO:K00029] [EC:1.1.1.40]
117617069  malate dehydrogenase [NADP], chloroplastic [KO:K00051] [EC:1.1.1.82]
117620826  aspartate aminotransferase, mitochondrial-like [KO:K14455] [EC:2.6.1.1]
117620827  aspartate aminotransferase, mitochondrial-like [KO:K14455] [EC:2.6.1.1]
117616179  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
117624715  malate dehydrogenase, cytoplasmic-like isoform X1 [KO:K00025] [EC:1.1.1.37]
117624411  malate dehydrogenase, mitochondrial-like isoform X1 [KO:K00026] [EC:1.1.1.37]
117624620  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
117636701  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
117627410  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
117617475  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial [KO:K00028] [EC:1.1.1.39]
117617700  NAD-dependent malic enzyme 62 kDa isoform, mitochondrial [KO:K00028] [EC:1.1.1.39]
117617857  NAD-dependent malic enzyme 62 kDa isoform, mitochondrial isoform X1 [KO:K00028] [EC:1.1.1.39]
Compound
C00001  H2O
C00011  CO2
C00022  Pyruvate
C00036  Oxaloacetate
C00041  L-Alanine
C00049  L-Aspartate
C00074  Phosphoenolpyruvate
C00085  D-Fructose 6-phosphate
C00111  Glycerone phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00149  (S)-Malate
C00197  3-Phospho-D-glycerate
C00199  D-Ribulose 5-phosphate
C00231  D-Xylulose 5-phosphate
C00236  3-Phospho-D-glyceroyl phosphate
C00279  D-Erythrose 4-phosphate
C00354  D-Fructose 1,6-bisphosphate
C00447  Sedoheptulose 1,7-bisphosphate
C01182  D-Ribulose 1,5-bisphosphate
C05382  Sedoheptulose 7-phosphate
Related
pathway
pdul00010  Glycolysis / Gluconeogenesis
pdul00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pdul00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00710   
LinkDB

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