KEGG   PATHWAY: pfg00630
Entry
pfg00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Pandoraea faecigallinarum
Class
Metabolism; Carbohydrate metabolism
Pathway map
pfg00630  Glyoxylate and dicarboxylate metabolism
pfg00630

Module
pfg_M00012  Glyoxylate cycle [PATH:pfg00630]
pfg_M00621  Glycine cleavage system [PATH:pfg00630]
Other DBs
GO: 0046487 0043648
Organism
Pandoraea faecigallinarum [GN:pfg]
Gene
AB870_21345  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
AB870_15915  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
AB870_18295  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
AB870_01500  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
AB870_02135  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
AB870_11805  malate synthase G [KO:K01638] [EC:2.3.3.9]
AB870_21360  malate synthase A [KO:K01638] [EC:2.3.3.9]
AB870_19960  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
AB870_19995  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
AB870_17985  citrate synthase [KO:K01647] [EC:2.3.3.1]
AB870_22340  excisionase [KO:K01647] [EC:2.3.3.1]
AB870_19950  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
AB870_02165  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
AB870_11975  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AB870_13390  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AB870_05700  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AB870_00890  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AB870_01205  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AB870_01230  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AB870_01225  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
AB870_00365  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
AB870_06735  glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
AB870_07250  glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
AB870_06745  glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
AB870_07255  glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
AB870_07260  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
AB870_13025  catalase [KO:K03781] [EC:1.11.1.6]
AB870_15825  catalase [KO:K03781] [EC:1.11.1.6]
AB870_22600  catalase HPII [KO:K03781] [EC:1.11.1.6]
AB870_13295  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
AB870_14620  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
AB870_15560  bifunctional glyoxylate/hydroxypyruvate reductase B [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
AB870_07205  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
AB870_07155  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
AB870_08725  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
AB870_04535  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
AB870_20800  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
AB870_04200  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AB870_10680  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
AB870_10690  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
AB870_20515  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
AB870_01425  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
AB870_10685  glycine cleavage system protein H [KO:K02437]
AB870_21175  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
AB870_21170  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
AB870_21165  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
AB870_02380  glycerate kinase [KO:K00865] [EC:2.7.1.165]
AB870_15005  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
AB870_15575  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
AB870_14860  formate dehydrogenase [KO:K00122] [EC:1.17.1.9]
AB870_18450  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
AB870_21910  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
AB870_18455  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
AB870_18645  sulfate ABC transporter substrate-binding protein [KO:K00123] [EC:1.17.1.9]
AB870_21900  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
AB870_18460  formate dehydrogenase [KO:K00124]
AB870_18655  formate dehydrogenase subunit beta [KO:K00124]
AB870_21895  formate dehydrogenase [KO:K00124]
AB870_18465  formate dehydrogenase subunit gamma [KO:K00127]
AB870_18660  formate dehydrogenase subunit gamma [KO:K00127]
AB870_21890  formate dehydrogenase [KO:K00127]
AB870_04100  esterase [KO:K01432] [EC:3.5.1.9]
AB870_04895  arylformamidase [KO:K07130] [EC:3.5.1.9]
AB870_14280  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
AB870_11520  formamidase [KO:K01455] [EC:3.5.1.49]
AB870_18515  oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
AB870_18520  formyl-CoA transferase [KO:K07749] [EC:2.8.3.16]
AB870_18530  formyl-CoA transferase [KO:K07749] [EC:2.8.3.16]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
pfg00010  Glycolysis / Gluconeogenesis
pfg00020  Citrate cycle (TCA cycle)
pfg00030  Pentose phosphate pathway
pfg00053  Ascorbate and aldarate metabolism
pfg00071  Fatty acid degradation
pfg00230  Purine metabolism
pfg00250  Alanine, aspartate and glutamate metabolism
pfg00260  Glycine, serine and threonine metabolism
pfg00620  Pyruvate metabolism
pfg00710  Carbon fixation by Calvin cycle
pfg00750  Vitamin B6 metabolism
pfg00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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