KEGG   PATHWAY: piz00970
Entry
piz00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Pseudomonas izuensis
Class
Genetic Information Processing; Translation
Pathway map
piz00970  Aminoacyl-tRNA biosynthesis
piz00970

Organism
Pseudomonas izuensis [GN:piz]
Gene
LAB08_R01140  tRNA-Ala [KO:K14218]
LAB08_R06430  tRNA-Ala [KO:K14218]
LAB08_R17810  tRNA-Ala [KO:K14218]
LAB08_R42540  tRNA-Ala [KO:K14218]
LAB08_R47210  tRNA-Ala [KO:K14218]
LAB08_R51840  tRNA-Ala [KO:K14218]
LAB08_R54990  tRNA-Ala [KO:K14218]
LAB08_R17790  tRNA-Ala [KO:K14218]
LAB08_R01760  tRNA-Arg [KO:K14219]
LAB08_R47310  tRNA-Arg [KO:K14219]
LAB08_R40510  tRNA-Arg [KO:K14219]
LAB08_R47270  tRNA-Arg [KO:K14219]
LAB08_R47320  tRNA-Arg [KO:K14219]
LAB08_R52440  tRNA-Asn [KO:K14220]
LAB08_R17710  tRNA-Asn [KO:K14220]
LAB08_R18080  tRNA-Asp [KO:K14221]
LAB08_R18090  tRNA-Asp [KO:K14221]
LAB08_R44550  tRNA-Asp [KO:K14221]
LAB08_R44570  tRNA-Asp [KO:K14221]
LAB08_R25750  tRNA-Cys [KO:K14222]
LAB08_R22660  tRNA-Gln [KO:K14223]
LAB08_R51470  tRNA-Gln [KO:K14223]
LAB08_R13420  tRNA-Glu [KO:K14224]
LAB08_R13440  tRNA-Glu [KO:K14224]
LAB08_R17800  tRNA-Glu [KO:K14224]
LAB08_R17820  tRNA-Glu [KO:K14224]
LAB08_R12510  tRNA-Gly [KO:K14225]
LAB08_R54920  tRNA-Gly [KO:K14225]
LAB08_R13430  tRNA-Gly [KO:K14225]
LAB08_R13450  tRNA-Gly [KO:K14225]
LAB08_R25740  tRNA-Gly [KO:K14225]
LAB08_R40480  tRNA-His [KO:K14226]
LAB08_R40500  tRNA-His [KO:K14226]
LAB08_R51850  tRNA-Ile [KO:K14227]
LAB08_R55000  tRNA-Ile [KO:K14227]
LAB08_R01130  tRNA-Ile [KO:K14227]
LAB08_R06420  tRNA-Ile [KO:K14227]
LAB08_R42550  tRNA-Ile [KO:K14227]
LAB08_R47220  tRNA-Ile [KO:K14227]
LAB08_R40490  tRNA-Leu [KO:K14228]
LAB08_R07030  tRNA-Leu [KO:K14228]
LAB08_R09080  tRNA-Leu [KO:K14228]
LAB08_R26310  tRNA-Leu [KO:K14228]
LAB08_R04900  tRNA-Leu [KO:K14228]
LAB08_R04890  tRNA-Leu [KO:K14228]
LAB08_R52420  tRNA-Lys [KO:K14229]
LAB08_R48440  tRNA-Lys [KO:K14229]
LAB08_R11420  tRNA-fMet [KO:K14230]
LAB08_R51600  tRNA-Met [KO:K14230]
LAB08_R55530  tRNA-Ile [KO:K14230]
LAB08_R11430  tRNA-fMet [KO:K14230]
LAB08_R07040  tRNA-fMet [KO:K14230]
LAB08_R02830  tRNA-Phe [KO:K14231]
LAB08_R52430  tRNA-Pro [KO:K14232]
LAB08_R52410  tRNA-Pro [KO:K14232]
LAB08_R18460  tRNA-Pro [KO:K14232]
LAB08_R43790  tRNA-Ser [KO:K14233]
LAB08_R12920  tRNA-Ser [KO:K14233]
LAB08_R23630  tRNA-Ser [KO:K14233]
LAB08_R47330  tRNA-Ser [KO:K14233]
LAB08_R07120  tRNA-Thr [KO:K14234]
LAB08_R54910  tRNA-Thr [KO:K14234]
LAB08_R02680  tRNA-Thr [KO:K14234]
LAB08_R54900  tRNA-Trp [KO:K14235]
LAB08_R54930  tRNA-Tyr [KO:K14236]
LAB08_R18150  tRNA-Val [KO:K14237]
LAB08_R44560  tRNA-Val [KO:K14237]
LAB08_R44580  tRNA-Val [KO:K14237]
LAB08_R18070  tRNA-Val [KO:K14237]
LAB08_R29760  tRNA-Sec [KO:K14238]
LAB08_R29750  tRNA-Sec [KO:K14238]
LAB08_R17780  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
LAB08_R07610  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
LAB08_R07600  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
LAB08_R07620  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
LAB08_R39630  glutamine--tRNA ligase/YqeY domain fusion protein [KO:K01886] [EC:6.1.1.18]
LAB08_R47360  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
LAB08_R48580  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
LAB08_R00080  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
LAB08_R00070  glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
LAB08_R18380  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
LAB08_R39180  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
LAB08_R29780  L-seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
LAB08_R39620  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
LAB08_R49580  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
LAB08_R00150  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
LAB08_R50050  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
LAB08_R53630  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
LAB08_R52630  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
LAB08_R10450  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
LAB08_R03630  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
LAB08_R11460  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
LAB08_R41790  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
LAB08_R09310  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
LAB08_R18420  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
LAB08_R18430  pheT; phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
LAB08_R55020  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
LAB08_R51000  tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
piz00250  Alanine, aspartate and glutamate metabolism
piz00260  Glycine, serine and threonine metabolism
piz00270  Cysteine and methionine metabolism
piz00290  Valine, leucine and isoleucine biosynthesis
piz00300  Lysine biosynthesis
piz00330  Arginine and proline metabolism
piz00340  Histidine metabolism
piz00380  Tryptophan metabolism
piz00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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