KEGG   PATHWAY: pjd01100
Entry
pjd01100                    Pathway                                
Name
Metabolic pathways - Paenibacillus sp. JDR-2
Class
Pathway map
pjd01100  Metabolic pathways
pjd01100

Module
pjd_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pjd01100]
pjd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pjd01100]
pjd_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pjd01100]
pjd_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pjd01100]
pjd_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pjd01100]
pjd_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pjd01100]
pjd_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pjd01100]
pjd_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pjd01100]
pjd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pjd01100]
pjd_M00015  Proline biosynthesis, glutamate => proline [PATH:pjd01100]
pjd_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:pjd01100]
pjd_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pjd01100]
pjd_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pjd01100]
pjd_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pjd01100]
pjd_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pjd01100]
pjd_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pjd01100]
pjd_M00026  Histidine biosynthesis, PRPP => histidine [PATH:pjd01100]
pjd_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pjd01100]
pjd_M00034  Methionine salvage pathway [PATH:pjd01100]
pjd_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pjd01100]
pjd_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pjd01100]
pjd_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pjd01100]
pjd_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pjd01100]
pjd_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pjd01100]
pjd_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pjd01100]
pjd_M00082  Fatty acid biosynthesis, initiation [PATH:pjd01100]
pjd_M00083  Fatty acid biosynthesis, elongation [PATH:pjd01100]
pjd_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pjd01100]
pjd_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pjd01100]
pjd_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:pjd01100]
pjd_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pjd01100]
pjd_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pjd01100]
pjd_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pjd01100]
pjd_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pjd01100]
pjd_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pjd01100]
pjd_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pjd01100]
pjd_M00135  GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:pjd01100]
pjd_M00151  Cytochrome bc1 complex respiratory unit [PATH:pjd01100]
pjd_M00155  Cytochrome c oxidase, prokaryotes [PATH:pjd01100]
pjd_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pjd01100]
pjd_M00168  CAM (Crassulacean acid metabolism), dark [PATH:pjd01100]
pjd_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pjd01100]
pjd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pjd01100]
pjd_M00345  Formaldehyde assimilation, ribulose monophosphate pathway [PATH:pjd01100]
pjd_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:pjd01100]
pjd_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pjd01100]
pjd_M00525  Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:pjd01100]
pjd_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:pjd01100]
pjd_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:pjd01100]
pjd_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pjd01100]
pjd_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pjd01100]
pjd_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pjd01100]
pjd_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pjd01100]
pjd_M00580  Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:pjd01100]
pjd_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:pjd01100]
pjd_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pjd01100]
pjd_M00793  dTDP-L-rhamnose biosynthesis [PATH:pjd01100]
pjd_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pjd01100]
pjd_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pjd01100]
pjd_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pjd01100]
pjd_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pjd01100]
pjd_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pjd01100]
pjd_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:pjd01100]
pjd_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:pjd01100]
pjd_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pjd01100]
pjd_M00970  Proline degradation, proline => glutamate [PATH:pjd01100]
pjd_M00972  Proline metabolism [PATH:pjd01100]
Organism
Paenibacillus sp. JDR-2 [GN:pjd]
Related
pathway
pjd00010  Glycolysis / Gluconeogenesis
pjd00020  Citrate cycle (TCA cycle)
pjd00030  Pentose phosphate pathway
pjd00040  Pentose and glucuronate interconversions
pjd00051  Fructose and mannose metabolism
pjd00052  Galactose metabolism
pjd00053  Ascorbate and aldarate metabolism
pjd00061  Fatty acid biosynthesis
pjd00071  Fatty acid degradation
pjd00100  Steroid biosynthesis
pjd00130  Ubiquinone and other terpenoid-quinone biosynthesis
pjd00190  Oxidative phosphorylation
pjd00220  Arginine biosynthesis
pjd00230  Purine metabolism
pjd00240  Pyrimidine metabolism
pjd00250  Alanine, aspartate and glutamate metabolism
pjd00260  Glycine, serine and threonine metabolism
pjd00261  Monobactam biosynthesis
pjd00270  Cysteine and methionine metabolism
pjd00280  Valine, leucine and isoleucine degradation
pjd00290  Valine, leucine and isoleucine biosynthesis
pjd00300  Lysine biosynthesis
pjd00310  Lysine degradation
pjd00330  Arginine and proline metabolism
pjd00332  Carbapenem biosynthesis
pjd00340  Histidine metabolism
pjd00350  Tyrosine metabolism
pjd00360  Phenylalanine metabolism
pjd00361  Chlorocyclohexane and chlorobenzene degradation
pjd00362  Benzoate degradation
pjd00380  Tryptophan metabolism
pjd00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pjd00401  Novobiocin biosynthesis
pjd00405  Phenazine biosynthesis
pjd00410  beta-Alanine metabolism
pjd00430  Taurine and hypotaurine metabolism
pjd00440  Phosphonate and phosphinate metabolism
pjd00450  Selenocompound metabolism
pjd00460  Cyanoamino acid metabolism
pjd00470  D-Amino acid metabolism
pjd00480  Glutathione metabolism
pjd00500  Starch and sucrose metabolism
pjd00511  Other glycan degradation
pjd00514  Other types of O-glycan biosynthesis
pjd00515  Mannose type O-glycan biosynthesis
pjd00520  Amino sugar and nucleotide sugar metabolism
pjd00521  Streptomycin biosynthesis
pjd00523  Polyketide sugar unit biosynthesis
pjd00525  Acarbose and validamycin biosynthesis
pjd00541  O-Antigen nucleotide sugar biosynthesis
pjd00542  O-Antigen repeat unit biosynthesis
pjd00543  Exopolysaccharide biosynthesis
pjd00550  Peptidoglycan biosynthesis
pjd00552  Teichoic acid biosynthesis
pjd00561  Glycerolipid metabolism
pjd00562  Inositol phosphate metabolism
pjd00564  Glycerophospholipid metabolism
pjd00592  alpha-Linolenic acid metabolism
pjd00600  Sphingolipid metabolism
pjd00620  Pyruvate metabolism
pjd00621  Dioxin degradation
pjd00622  Xylene degradation
pjd00625  Chloroalkane and chloroalkene degradation
pjd00627  Aminobenzoate degradation
pjd00630  Glyoxylate and dicarboxylate metabolism
pjd00640  Propanoate metabolism
pjd00643  Styrene degradation
pjd00650  Butanoate metabolism
pjd00660  C5-Branched dibasic acid metabolism
pjd00670  One carbon pool by folate
pjd00680  Methane metabolism
pjd00730  Thiamine metabolism
pjd00740  Riboflavin metabolism
pjd00750  Vitamin B6 metabolism
pjd00760  Nicotinate and nicotinamide metabolism
pjd00770  Pantothenate and CoA biosynthesis
pjd00780  Biotin metabolism
pjd00785  Lipoic acid metabolism
pjd00790  Folate biosynthesis
pjd00791  Atrazine degradation
pjd00860  Porphyrin metabolism
pjd00900  Terpenoid backbone biosynthesis
pjd00907  Pinene, camphor and geraniol degradation
pjd00909  Sesquiterpenoid and triterpenoid biosynthesis
pjd00910  Nitrogen metabolism
pjd00920  Sulfur metabolism
pjd00946  Degradation of flavonoids
pjd00998  Biosynthesis of various antibiotics
pjd00999  Biosynthesis of various plant secondary metabolites
KO pathway
ko01100   
LinkDB

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