KEGG   PATHWAY: pjd00230
Entry
pjd00230                    Pathway                                
Name
Purine metabolism - Paenibacillus sp. JDR-2
Class
Metabolism; Nucleotide metabolism
Pathway map
pjd00230  Purine metabolism
pjd00230

Module
pjd_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pjd00230]
pjd_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pjd00230]
pjd_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pjd00230]
pjd_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pjd00230]
pjd_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pjd00230]
Other DBs
GO: 0006163 0042278
Organism
Paenibacillus sp. JDR-2 [GN:pjd]
Gene
Pjdr2_2327  NUDIX hydrolase [KO:K01515] [EC:3.6.1.13 3.6.1.-]
Pjdr2_2334  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
Pjdr2_5787  Glucose-1,6-bisphosphate synthase [KO:K01835] [EC:5.4.2.2]
Pjdr2_0167  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
Pjdr2_2018  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
Pjdr2_0867  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
Pjdr2_0871  phosphoribosylamine/glycine ligase [KO:K01945] [EC:6.3.4.13]
Pjdr2_0869  phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
Pjdr2_2491  phosphoribosylglycinamide formyltransferase 2 [KO:K08289] [EC:6.3.1.21]
Pjdr2_0866  phosphoribosylformylglycinamidine synthase II [KO:K23269] [EC:6.3.5.3]
Pjdr2_0864  phosphoribosylformylglycinamidine synthase, purS [KO:K23264] [EC:6.3.5.3]
Pjdr2_0865  phosphoribosylformylglycinamidine synthase I [KO:K23265] [EC:6.3.5.3 3.5.1.2]
Pjdr2_0868  phosphoribosylformylglycinamidine cyclo-ligase [KO:K01933] [EC:6.3.3.1]
Pjdr2_0861  phosphoribosylaminoimidazole carboxylase, ATPase subunit [KO:K01589] [EC:6.3.4.18]
Pjdr2_0860  phosphoribosylaminoimidazole carboxylase, catalytic subunit [KO:K01588] [EC:5.4.99.18]
Pjdr2_0863  Phosphoribosylaminoimidazolesuccinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
Pjdr2_0862  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
Pjdr2_0870  phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [KO:K00602] [EC:2.1.2.3 3.5.4.10]
Pjdr2_4907  hypothetical protein [KO:K11176] [EC:3.5.4.10]
Pjdr2_4385  adenine phosphoribosyltransferase [KO:K00759] [EC:2.4.2.7]
Pjdr2_4611  metallophosphoesterase [KO:K01081] [EC:3.1.3.5]
Pjdr2_0438  5'-Nucleotidase domain protein [KO:K11751] [EC:3.1.3.5 3.6.1.45]
Pjdr2_2335  purine nucleoside phosphorylase I, inosine and guanosine-specific [KO:K03783] [EC:2.4.2.1]
Pjdr2_1255  protein of unknown function DUF1255 [KO:K09913] [EC:2.4.2.1 2.4.2.2]
Pjdr2_3879  protein of unknown function DUF152 [KO:K05810] [EC:2.4.2.1 2.4.2.28 3.5.4.4]
Pjdr2_0062  hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
Pjdr2_0089  inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
Pjdr2_5246  Nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
Pjdr2_2412  Nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
Pjdr2_1217  Nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
Pjdr2_4457  Ham1 family protein [KO:K01519] [EC:3.6.1.66]
Pjdr2_3999  xanthine phosphoribosyltransferase [KO:K03816] [EC:2.4.2.22]
Pjdr2_1053  xanthine phosphoribosyltransferase [KO:K03816] [EC:2.4.2.22]
Pjdr2_2159  xanthine phosphoribosyltransferase [KO:K03816] [EC:2.4.2.22]
Pjdr2_3318  xanthine dehydrogenase D subunit [KO:K00087] [EC:1.17.1.4]
Pjdr2_0836  GMP synthase, large subunit [KO:K01951] [EC:6.3.5.2]
Pjdr2_3765  guanylate kinase [KO:K00942] [EC:2.7.4.8]
Pjdr2_3990  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [KO:K00525] [EC:1.17.4.1]
Pjdr2_4011  ribonucleoside-diphosphate reductase, alpha subunit [KO:K00525] [EC:1.17.4.1]
Pjdr2_4010  Ribonucleoside-diphosphate reductase [KO:K00526] [EC:1.17.4.1]
Pjdr2_5890  deoxyguanosinetriphosphate triphosphohydrolase [KO:K01129] [EC:3.1.5.1]
Pjdr2_1496  metal dependent phosphohydrolase [KO:K08722] [EC:3.1.3.89]
Pjdr2_4379  (p)ppGpp synthetase I, SpoT/RelA [KO:K01139] [EC:2.7.6.5 3.1.7.2]
Pjdr2_4474  Ppx/GppA phosphatase [KO:K01524] [EC:3.6.1.11 3.6.1.40]
Pjdr2_2152  RelA/SpoT domain protein [KO:K07816] [EC:2.7.6.5]
Pjdr2_5952  RelA/SpoT domain protein [KO:K07816] [EC:2.7.6.5]
Pjdr2_5420  adenylate cyclase [KO:K01768] [EC:4.6.1.1]
Pjdr2_6258  adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
Pjdr2_0612  adenylosuccinate synthetase [KO:K01939] [EC:6.3.4.4]
Pjdr2_1278  deoxynucleoside kinase [KO:K15519] [EC:2.7.1.76 2.7.1.74]
Pjdr2_3310  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
Pjdr2_1876  adenine deaminase [KO:K01486] [EC:3.5.4.2]
Pjdr2_5940  2',3'-cyclic-nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
Pjdr2_2801  5'-Nucleotidase domain protein [KO:K01119] [EC:3.1.4.16 3.1.3.6]
Pjdr2_3376  metallophosphoesterase [KO:K09769] [EC:3.1.4.16]
Pjdr2_5659  adenylate kinase [KO:K00939] [EC:2.7.4.3]
Pjdr2_1893  metallophosphoesterase [KO:K03651] [EC:3.1.4.53]
Pjdr2_6062  metallophosphoesterase [KO:K03651] [EC:3.1.4.53]
Pjdr2_0542  metallophosphoesterase [KO:K03651] [EC:3.1.4.53]
Pjdr2_4239  sulfate adenylyltransferase, large subunit [KO:K00955] [EC:2.7.7.4 2.7.1.25]
Pjdr2_4461  adenylylsulfate kinase [KO:K00860] [EC:2.7.1.25]
Pjdr2_4240  sulfate adenylyltransferase, small subunit [KO:K00957] [EC:2.7.7.4]
Pjdr2_3315  urate oxidase [KO:K16838] [EC:1.7.3.3 4.1.1.97]
Pjdr2_3314  hydroxyisourate hydrolase [KO:K07127] [EC:3.5.2.17]
Pjdr2_3316  OHCU decarboxylase [KO:K13485] [EC:4.1.1.97]
Pjdr2_3313  allantoinase [KO:K01466] [EC:3.5.2.5]
Pjdr2_3312  amidase, hydantoinase/carbamoylase family [KO:K02083] [EC:3.5.3.9]
Pjdr2_4691  amidase, hydantoinase/carbamoylase family [KO:K02083] [EC:3.5.3.9]
Pjdr2_3311  aminotransferase class V [KO:K00839] [EC:2.6.1.112]
Pjdr2_4326  urease, alpha subunit [KO:K01428] [EC:3.5.1.5]
Pjdr2_4327  urease, beta subunit [KO:K01429] [EC:3.5.1.5]
Pjdr2_4328  urease, gamma subunit [KO:K01430] [EC:3.5.1.5]
Pjdr2_5903  gamma-glutamyltransferase [KO:K22602] [EC:3.5.1.126]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
pjd00030  Pentose phosphate pathway
pjd00220  Arginine biosynthesis
pjd00250  Alanine, aspartate and glutamate metabolism
pjd00260  Glycine, serine and threonine metabolism
pjd00340  Histidine metabolism
pjd00630  Glyoxylate and dicarboxylate metabolism
pjd00730  Thiamine metabolism
pjd00740  Riboflavin metabolism
pjd00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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