KEGG   PATHWAY: pjd00010
Entry
pjd00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Paenibacillus sp. JDR-2
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pjd00010  Glycolysis / Gluconeogenesis
pjd00010

Module
pjd_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pjd00010]
pjd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pjd00010]
pjd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pjd00010]
Other DBs
GO: 0006096 0006094
Organism
Paenibacillus sp. JDR-2 [GN:pjd]
Gene
Pjdr2_0170  glucokinase, ROK family [KO:K25026] [EC:2.7.1.2]
Pjdr2_1257  Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Pjdr2_2123  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Pjdr2_1216  fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
Pjdr2_3282  fructose-16-bisphosphatase [KO:K04041] [EC:3.1.3.11]
Pjdr2_6054  fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
Pjdr2_0179  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Pjdr2_3232  Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) [KO:K00134] [EC:1.2.1.12]
Pjdr2_0177  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Pjdr2_5428  Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) [KO:K00134] [EC:1.2.1.12]
Pjdr2_1716  Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) [KO:K00134] [EC:1.2.1.12]
Pjdr2_0178  Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Pjdr2_0911  Phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
Pjdr2_1877  phosphoglycerate mutase 1 family [KO:K01834] [EC:5.4.2.11]
Pjdr2_2862  Phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
Pjdr2_0180  phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [KO:K15633] [EC:5.4.2.12]
Pjdr2_0181  enolase [KO:K01689] [EC:4.2.1.11]
Pjdr2_4477  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Pjdr2_1068  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Pjdr2_2650  pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [KO:K00161] [EC:1.2.4.1]
Pjdr2_2651  Transketolase central region [KO:K00162] [EC:1.2.4.1]
Pjdr2_2652  catalytic domain of components of various dehydrogenase complexes [KO:K00627] [EC:2.3.1.12]
Pjdr2_2320  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Pjdr2_2653  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Pjdr2_1144  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Pjdr2_3373  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Pjdr2_3372  pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Pjdr2_5353  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
Pjdr2_3697  Alcohol dehydrogenase GroES domain protein [KO:K13979] [EC:1.1.1.2]
Pjdr2_4172  Alcohol dehydrogenase GroES domain protein [KO:K13979] [EC:1.1.1.2]
Pjdr2_5985  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
Pjdr2_5424  Aldehyde dehydrogenase (NAD(+)) [KO:K00138] [EC:1.2.1.-]
Pjdr2_4673  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
Pjdr2_3796  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
Pjdr2_5189  Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
Pjdr2_5027  Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
Pjdr2_5787  Glucose-1,6-bisphosphate synthase [KO:K01835] [EC:5.4.2.2]
Pjdr2_0850  glycoside hydrolase family 4 [KO:K01222] [EC:3.2.1.86]
Pjdr2_2010  PTS system, glucose subfamily, IIA subunit [KO:K02777] [EC:2.7.1.-]
Pjdr2_3805  PTS system, glucose subfamily, IIA subunit [KO:K20118] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pjd00020  Citrate cycle (TCA cycle)
pjd00030  Pentose phosphate pathway
pjd00500  Starch and sucrose metabolism
pjd00620  Pyruvate metabolism
pjd00640  Propanoate metabolism
pjd00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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