KEGG   PATHWAY: plal00630
Entry
plal00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Pseudomonas lalkuanensis
Class
Metabolism; Carbohydrate metabolism
Pathway map
plal00630  Glyoxylate and dicarboxylate metabolism
plal00630

Module
plal_M00012  Glyoxylate cycle [PATH:plal00630]
plal_M00621  Glycine cleavage system [PATH:plal00630]
Other DBs
GO: 0046487 0043648
Organism
Pseudomonas lalkuanensis [GN:plal]
Gene
FXN65_13445  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
FXN65_15685  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
FXN65_20725  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
FXN65_23660  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
FXN65_11725  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
FXN65_11820  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
FXN65_13660  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
FXN65_13985  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
FXN65_02235  malate synthase G [KO:K01638] [EC:2.3.3.9]
FXN65_11055  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
FXN65_10050  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
FXN65_18715  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
FXN65_18100  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
FXN65_17085  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
FXN65_23060  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
FXN65_23670  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
FXN65_24615  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
FXN65_06340  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
FXN65_06395  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
FXN65_10970  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
FXN65_11830  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
FXN65_12695  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
FXN65_13165  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
FXN65_13755  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
FXN65_20520  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
FXN65_03055  catalase [KO:K03781] [EC:1.11.1.6]
FXN65_15855  catalase family peroxidase [KO:K03781] [EC:1.11.1.6]
FXN65_20305  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
FXN65_23080  2-hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
FXN65_18650  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
FXN65_00285  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
FXN65_02680  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
FXN65_01090  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
FXN65_01100  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
FXN65_02415  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
FXN65_26190  glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
FXN65_27580  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
FXN65_06935  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
FXN65_08085  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
FXN65_11050  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
FXN65_16275  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
FXN65_20160  hypothetical protein [KO:K00600] [EC:2.1.2.1]
FXN65_20190  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
FXN65_21000  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
FXN65_02130  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
FXN65_04140  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
FXN65_20195  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
FXN65_20995  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
FXN65_26680  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
FXN65_12285  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
FXN65_20180  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
FXN65_21010  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
FXN65_26690  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
FXN65_12275  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
FXN65_10085  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FXN65_15840  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
FXN65_20200  gcvH; glycine cleavage system protein GcvH [KO:K02437]
FXN65_20990  gcvH; glycine cleavage system protein GcvH [KO:K02437]
FXN65_26685  gcvH; glycine cleavage system protein GcvH [KO:K02437]
FXN65_12290  gcvH; glycine cleavage system protein GcvH [KO:K02437]
FXN65_19120  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
FXN65_19125  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
FXN65_07630  TIM barrel protein [KO:K01816] [EC:5.3.1.22]
FXN65_19130  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
FXN65_19135  glycerate kinase [KO:K11529] [EC:2.7.1.165]
FXN65_20320  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
FXN65_16255  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
FXN65_06630  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
FXN65_09255  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
FXN65_01975  formate dehydrogenase subunit delta [KO:K00126] [EC:1.17.1.9]
FXN65_24775  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
FXN65_01970  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
FXN65_24770  fdxH; formate dehydrogenase subunit beta [KO:K00124]
FXN65_01965  formate dehydrogenase [KO:K00124]
FXN65_24765  formate dehydrogenase subunit gamma [KO:K00127]
FXN65_01960  formate dehydrogenase subunit gamma [KO:K00127]
FXN65_06760  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
FXN65_02155  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
FXN65_05675  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
FXN65_14420  acetamidase [KO:K01455] [EC:3.5.1.49]
FXN65_26010  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
plal00010  Glycolysis / Gluconeogenesis
plal00020  Citrate cycle (TCA cycle)
plal00030  Pentose phosphate pathway
plal00053  Ascorbate and aldarate metabolism
plal00071  Fatty acid degradation
plal00230  Purine metabolism
plal00250  Alanine, aspartate and glutamate metabolism
plal00260  Glycine, serine and threonine metabolism
plal00620  Pyruvate metabolism
plal00710  Carbon fixation by Calvin cycle
plal00750  Vitamin B6 metabolism
plal00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system