KEGG   PATHWAY: pleo00240
Entry
pleo00240                   Pathway                                
Name
Pyrimidine metabolism - Pleomorphomonas sp. SM30
Class
Metabolism; Nucleotide metabolism
Pathway map
pleo00240  Pyrimidine metabolism
pleo00240

Module
pleo_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pleo00240]
pleo_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pleo00240]
Other DBs
GO: 0006220 0006213
Organism
Pleomorphomonas sp. SM30 [GN:pleo]
Gene
OHA_1_02176  carB; carbamoyl-phosphate synthase large chain [KO:K01955] [EC:6.3.5.5]
OHA_1_02172  carA; carbamoyl-phosphate synthase small chain [KO:K01956] [EC:6.3.5.5]
OHA_1_00837  pyrB; aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
OHA_1_00196  lhyD; L-hydantoinase [KO:K01465] [EC:3.5.2.3]
OHA_1_00836  pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
OHA_1_02295  pyrD; dihydroorotate dehydrogenase (quinone) [KO:K00254] [EC:1.3.5.2]
OHA_1_01190  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
OHA_1_02019  orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
OHA_1_00122  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
OHA_1_01013  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
OHA_1_00905  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
OHA_1_02997  yceF; Maf-like protein YceF [KO:K06287] [EC:3.6.1.-]
OHA_1_03850  yhdE; Maf-like protein YhdE [KO:K06287] [EC:3.6.1.-]
OHA_1_00609  pyrG; CTP synthase [KO:K01937] [EC:6.3.4.2]
OHA_1_02965  cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25]
OHA_1_03493  yfkN; trifunctional nucleotide phosphoesterase protein YfkN precursor [KO:K11751] [EC:3.1.3.5 3.6.1.45]
OHA_1_00624  surE_1; 5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
OHA_1_01698  surE_2; 5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
OHA_1_02793  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
OHA_1_00701  cpdB; 2', 3'-cyclic-nucleotide2'-phosphodiesterase/3'-nucleotidase precursor [KO:K01119] [EC:3.1.4.16 3.1.3.6]
OHA_1_03701  hypothetical protein [KO:K09769] [EC:3.1.4.16]
OHA_1_00007  psuG; pseudouridine-5'-phosphate glycosidase [KO:K16329] [EC:4.2.1.70]
OHA_1_02800  cdd; cytidine deaminase [KO:K01489] [EC:3.5.4.5]
OHA_1_02810  codA_2; cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
OHA_1_02443  codA_1; cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
OHA_2_00017  codA; cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
OHA_1_02361  2'-deoxycytidine 5'-triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
OHA_1_00289  nrdJ; vitamin B12-dependent ribonucleotide reductase [KO:K00525] [EC:1.17.4.1]
OHA_1_00606  hypothetical protein [KO:K06952] [EC:3.1.3.89]
OHA_1_00830  tmk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
OHA_1_02991  dut; deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
OHA_1_02796  deoA; thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
OHA_1_04181  thyA; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
OHA_1_01606  MauM; MauM, putative ferredoxin-type protein essential for electron transfer [KO:K17722] [EC:1.3.1.1]
OHA_1_01605  preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA [KO:K17723] [EC:1.3.1.1]
OHA_1_01463  dht; D-hydantoinase/dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
OHA_1_04053  amaB_3; N-carbamoyl-L-amino acid hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
OHA_1_01594  amaB_2; N-carbamoyl-L-amino acid hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
OHA_1_01930  putative hydrolase/MSMEI_3903 [KO:K06016] [EC:3.5.1.6 3.5.1.87]
OHA_1_00475  rutF_3; FMN reductase (NADH) RutF [KO:K09024] [EC:1.5.1.-]
OHA_1_03168  rutF_4; FMN reductase (NADH) RutF [KO:K09024] [EC:1.5.1.-]
OHA_1_00247  rutF_2; FMN reductase (NADH) RutF [KO:K09024] [EC:1.5.1.-]
OHA_1_02489  rutE; putative malonic semialdehyde reductase RutE [KO:K09019] [EC:1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
Related
pathway
pleo00030  Pentose phosphate pathway
pleo00220  Arginine biosynthesis
pleo00250  Alanine, aspartate and glutamate metabolism
pleo00280  Valine, leucine and isoleucine degradation
pleo00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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