KEGG   PATHWAY: plyc00010
Entry
plyc00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Paenibacillus lycopersici
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
plyc00010  Glycolysis / Gluconeogenesis
plyc00010

Module
plyc_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:plyc00010]
plyc_M00002  Glycolysis, core module involving three-carbon compounds [PATH:plyc00010]
plyc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:plyc00010]
Other DBs
GO: 0006096 0006094
Organism
Paenibacillus lycopersici [GN:plyc]
Gene
GXP70_28745  ROK family protein [KO:K25026] [EC:2.7.1.2]
GXP70_22715  ROK family protein [KO:K25026] [EC:2.7.1.2]
GXP70_06650  ROK family protein [KO:K25026] [EC:2.7.1.2]
GXP70_15880  ROK family protein [KO:K25026] [EC:2.7.1.2]
GXP70_16640  ROK family protein [KO:K25026] [EC:2.7.1.2]
GXP70_02210  ROK family glucokinase [KO:K25026] [EC:2.7.1.2]
GXP70_07370  ROK family protein [KO:K25026] [EC:2.7.1.2]
GXP70_14960  ROK family protein [KO:K25026] [EC:2.7.1.2]
GXP70_24175  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
GXP70_09535  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
GXP70_15060  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
GXP70_14985  class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
GXP70_01930  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
GXP70_02270  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
GXP70_27120  aldehyde dehydrogenase [KO:K00134] [EC:1.2.1.12]
GXP70_02260  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
GXP70_02265  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
GXP70_04040  histidine phosphatase family protein [KO:K01834] [EC:5.4.2.11]
GXP70_07815  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
GXP70_11805  histidine phosphatase family protein [KO:K15634] [EC:5.4.2.11]
GXP70_16350  histidine phosphatase family protein [KO:K15634] [EC:5.4.2.11]
GXP70_02275  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
GXP70_02280  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
GXP70_04150  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
GXP70_09345  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
GXP70_27085  hypothetical protein [KO:K01007] [EC:2.7.9.2]
GXP70_17880  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
GXP70_17875  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
GXP70_17870  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
GXP70_17865  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GXP70_11300  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GXP70_17770  pyruvate synthase [KO:K00169] [EC:1.2.7.1]
GXP70_17775  4Fe-4S dicluster domain-containing protein [KO:K00172] [EC:1.2.7.1]
GXP70_12985  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
GXP70_12990  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
GXP70_14115  zinc-dependent alcohol dehydrogenase family protein [KO:K00001] [EC:1.1.1.1]
GXP70_19590  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
GXP70_14110  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
GXP70_22655  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
GXP70_13705  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
GXP70_19050  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
GXP70_21810  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
GXP70_28295  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
GXP70_19100  PTS transporter subunit EIIC [KO:K20118] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
plyc00020  Citrate cycle (TCA cycle)
plyc00030  Pentose phosphate pathway
plyc00500  Starch and sucrose metabolism
plyc00620  Pyruvate metabolism
plyc00640  Propanoate metabolism
plyc00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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