KEGG   PATHWAY: pmet00010
Entry
pmet00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Phototrophicus methaneseepsis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pmet00010  Glycolysis / Gluconeogenesis
pmet00010

Module
pmet_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pmet00010]
pmet_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pmet00010]
pmet_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pmet00010]
pmet_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pmet00010]
Other DBs
GO: 0006096 0006094
Organism
Phototrophicus methaneseepsis [GN:pmet]
Gene
G4Y79_06755  ROK family protein [KO:K25026] [EC:2.7.1.2]
G4Y79_17890  ROK family protein [KO:K25026] [EC:2.7.1.2]
G4Y79_20400  ROK family protein [KO:K25026] [EC:2.7.1.2]
G4Y79_08170  bifunctional transaldolase/phosoglucose isomerase [KO:K13810] [EC:2.2.1.2 5.3.1.9]
G4Y79_19525  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
G4Y79_02155  1-phosphofructokinase family hexose kinase [KO:K16370] [EC:2.7.1.11]
G4Y79_04220  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
G4Y79_00280  fbp; class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
G4Y79_24425  class I fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
G4Y79_15745  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
G4Y79_00130  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
G4Y79_05660  aldehyde dehydrogenase [KO:K00134] [EC:1.2.1.12]
G4Y79_15765  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
G4Y79_01775  type II glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
G4Y79_01975  type II glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
G4Y79_15760  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
G4Y79_00270  histidine phosphatase family protein [KO:K01834] [EC:5.4.2.11]
G4Y79_15575  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
G4Y79_09005  hypothetical protein [KO:K00873] [EC:2.7.1.40]
G4Y79_15570  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
G4Y79_24310  hypothetical protein [KO:K01007] [EC:2.7.9.2]
G4Y79_22845  pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
G4Y79_22840  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
G4Y79_22835  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
G4Y79_20290  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
G4Y79_12655  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
G4Y79_12650  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
G4Y79_17100  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
G4Y79_02385  Zn-dependent alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
G4Y79_06815  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
G4Y79_19515  aldose epimerase [KO:K01785] [EC:5.1.3.3]
G4Y79_18225  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
G4Y79_15815  ROK family protein [KO:K00886] [EC:2.7.1.63]
G4Y79_17960  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
G4Y79_06580  glycoside hydrolase [KO:K01222] [EC:3.2.1.86]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pmet00020  Citrate cycle (TCA cycle)
pmet00030  Pentose phosphate pathway
pmet00500  Starch and sucrose metabolism
pmet00620  Pyruvate metabolism
pmet00640  Propanoate metabolism
pmet00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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