KEGG   PATHWAY: pob00010
Entry
pob00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Polaribacter vadi
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pob00010  Glycolysis / Gluconeogenesis
pob00010

Module
pob_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pob00010]
pob_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pob00010]
pob_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pob00010]
pob_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pob00010]
Other DBs
GO: 0006096 0006094
Organism
Polaribacter vadi [GN:pob]
Gene
LPB03_12325  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
LPB03_03625  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
LPB03_12775  fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
LPB03_13615  class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
LPB03_06255  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
LPB03_03620  type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
LPB03_00050  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
LPB03_11710  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
LPB03_02110  phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
LPB03_08925  phosphoglycerate mutase (2,3-diphosphoglycerate-independent) [KO:K15633] [EC:5.4.2.12]
LPB03_15560  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
LPB03_11435  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
LPB03_04570  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
LPB03_03860  pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
LPB03_14985  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
LPB03_03865  pyruvate dehydrogenase [KO:K00627] [EC:2.3.1.12]
LPB03_16275  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LPB03_09035  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LPB03_11840  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
LPB03_14130  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
LPB03_06570  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
LPB03_14160  hypothetical protein [KO:K01785] [EC:5.1.3.3]
LPB03_16425  haloacid dehalogenase [KO:K20866] [EC:3.1.3.10]
LPB03_16060  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
LPB03_04145  polyphosphate glucokinase [KO:K00886] [EC:2.7.1.63]
LPB03_09330  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
LPB03_14890  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pob00020  Citrate cycle (TCA cycle)
pob00030  Pentose phosphate pathway
pob00500  Starch and sucrose metabolism
pob00620  Pyruvate metabolism
pob00640  Propanoate metabolism
pob00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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