KEGG   PATHWAY: ppar00970
Entry
ppar00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Pectobacterium parmentieri RNS08.42.1A
Class
Genetic Information Processing; Translation
Pathway map
ppar00970  Aminoacyl-tRNA biosynthesis
ppar00970

Organism
Pectobacterium parmentieri RNS08.42.1A [GN:ppar]
Gene
A8F97_13220  tRNA-Ala [KO:K14218]
A8F97_12900  tRNA-Ala [KO:K14218]
A8F97_12905  tRNA-Ala [KO:K14218]
A8F97_18835  tRNA-Ala [KO:K14218]
A8F97_20315  tRNA-Ala [KO:K14218]
A8F97_20530  tRNA-Arg [KO:K14219]
A8F97_13340  tRNA-Arg [KO:K14219]
A8F97_11860  tRNA-Arg [KO:K14219]
A8F97_11585  tRNA-Arg [KO:K14219]
A8F97_13345  tRNA-Arg [KO:K14219]
A8F97_13350  tRNA-Arg [KO:K14219]
A8F97_09945  tRNA-Asn [KO:K14220]
A8F97_10160  tRNA-Asn [KO:K14220]
A8F97_10460  tRNA-Asn [KO:K14220]
A8F97_13170  tRNA-Asp [KO:K14221]
A8F97_13205  tRNA-Asp [KO:K14221]
A8F97_20330  tRNA-Asp [KO:K14221]
A8F97_10405  tRNA-Cys [KO:K14222]
A8F97_02995  tRNA-Gln [KO:K14223]
A8F97_03010  tRNA-Gln [KO:K14223]
A8F97_03005  tRNA-Gln [KO:K14223]
A8F97_01120  tRNA-Glu [KO:K14224]
A8F97_17220  tRNA-Glu [KO:K14224]
A8F97_17415  tRNA-Glu [KO:K14224]
A8F97_21685  tRNA-Glu [KO:K14224]
A8F97_05130  tRNA-Gly [KO:K14225]
A8F97_10410  tRNA-Gly [KO:K14225]
A8F97_21850  tRNA-Gly [KO:K14225]
A8F97_21855  tRNA-Gly [KO:K14225]
A8F97_14600  tRNA-Gly [KO:K14225]
A8F97_17370  tRNA-Gly [KO:K14225]
A8F97_20535  tRNA-His [KO:K14226]
A8F97_13225  tRNA-Ile [KO:K14227]
A8F97_18830  tRNA-Ile [KO:K14227]
A8F97_20310  tRNA-Ile [KO:K14227]
A8F97_16215  tRNA-Leu [KO:K14228]
A8F97_03015  tRNA-Leu [KO:K14228]
A8F97_14935  tRNA-Leu [KO:K14228]
A8F97_10400  tRNA-Leu [KO:K14228]
A8F97_14780  tRNA-Leu [KO:K14228]
A8F97_14785  tRNA-Leu [KO:K14228]
A8F97_14790  tRNA-Leu [KO:K14228]
A8F97_20540  tRNA-Leu [KO:K14228]
A8F97_03260  tRNA-Lys [KO:K14229]
A8F97_03265  tRNA-Lys [KO:K14229]
A8F97_12935  tRNA-Lys [KO:K14229]
A8F97_10440  tRNA-Lys [KO:K14229]
A8F97_15055  tRNA-Met [KO:K14230]
A8F97_03020  tRNA-Met [KO:K14230]
A8F97_14930  tRNA-Met [KO:K14230]
A8F97_01735  tRNA-Met [KO:K14230]
A8F97_01740  tRNA-Met [KO:K14230]
A8F97_01745  tRNA-Met [KO:K14230]
A8F97_03000  tRNA-Met [KO:K14230]
A8F97_01560  tRNA-Phe [KO:K14231]
A8F97_15370  tRNA-Phe [KO:K14231]
A8F97_19005  tRNA-Pro [KO:K14232]
A8F97_09325  tRNA-Pro [KO:K14232]
A8F97_20545  tRNA-Pro [KO:K14232]
A8F97_13355  tRNA-Ser [KO:K14233]
A8F97_04320  tRNA-Ser [KO:K14233]
A8F97_03425  tRNA-Ser [KO:K14233]
A8F97_04415  tRNA-Ser [KO:K14233]
A8F97_08485  tRNA-Ser [KO:K14233]
A8F97_10150  tRNA-Ser [KO:K14233]
A8F97_01135  tRNA-Thr [KO:K14234]
A8F97_17365  tRNA-Thr [KO:K14234]
A8F97_17380  tRNA-Thr [KO:K14234]
A8F97_01500  tRNA-Thr [KO:K14234]
A8F97_20335  tRNA-Trp [KO:K14235]
A8F97_07245  tRNA-Tyr [KO:K14236]
A8F97_17375  tRNA-Tyr [KO:K14236]
A8F97_05305  tRNA-Val [KO:K14237]
A8F97_12920  tRNA-Val [KO:K14237]
A8F97_05200  tRNA-Val [KO:K14237]
A8F97_12925  tRNA-Val [KO:K14237]
A8F97_12930  tRNA-Val [KO:K14237]
A8F97_12915  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
A8F97_03050  glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
A8F97_13365  alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
A8F97_08370  aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
A8F97_08570  asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
A8F97_19205  glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
A8F97_19210  glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
A8F97_07710  threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
A8F97_08895  serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
A8F97_14335  L-seryl-tRNA selenium transferase [KO:K01042] [EC:2.9.1.1]
A8F97_12150  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
A8F97_03475  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
A8F97_21635  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
A8F97_16240  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
A8F97_02930  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
A8F97_22255  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
A8F97_14615  lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
A8F97_08435  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
A8F97_01080  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
A8F97_12560  histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
A8F97_07690  phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
A8F97_07685  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
A8F97_05380  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
A8F97_21205  tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
ppar00250  Alanine, aspartate and glutamate metabolism
ppar00260  Glycine, serine and threonine metabolism
ppar00270  Cysteine and methionine metabolism
ppar00290  Valine, leucine and isoleucine biosynthesis
ppar00300  Lysine biosynthesis
ppar00330  Arginine and proline metabolism
ppar00340  Histidine metabolism
ppar00380  Tryptophan metabolism
ppar00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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