KEGG   PATHWAY: ppoi00630
Entry
ppoi00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Pollicipes pollicipes (gooseneck barnacle)
Class
Metabolism; Carbohydrate metabolism
Pathway map
ppoi00630  Glyoxylate and dicarboxylate metabolism
ppoi00630

Module
ppoi_M00621  Glycine cleavage system [PATH:ppoi00630]
ppoi_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:ppoi00630]
Other DBs
GO: 0046487 0043648
Organism
Pollicipes pollicipes (gooseneck barnacle) [GN:ppoi]
Gene
119105811  acetyl-coenzyme A synthetase, cytoplasmic-like [KO:K01895] [EC:6.2.1.1]
119099256  acetyl-coenzyme A synthetase, cytoplasmic-like [KO:K01895] [EC:6.2.1.1]
119103660  LOW QUALITY PROTEIN: acetyl-coenzyme A synthetase 2-like, mitochondrial [KO:K01895] [EC:6.2.1.1]
119103671  acetyl-coenzyme A synthetase 2-like, mitochondrial [KO:K01895] [EC:6.2.1.1]
119099970  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
119100714  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
119100716  LOW QUALITY PROTEIN: malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
119110232  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
119105769  probable citrate synthase 2, mitochondrial [KO:K01647] [EC:2.3.3.1]
119105829  probable citrate synthase 2, mitochondrial [KO:K01647] [EC:2.3.3.1]
119089370  cytoplasmic aconitate hydratase-like [KO:K01681] [EC:4.2.1.3]
119111913  cytoplasmic aconitate hydratase-like isoform X1 [KO:K01681] [EC:4.2.1.3]
119113732  aconitate hydratase, mitochondrial-like [KO:K01681] [EC:4.2.1.3]
119103267  acetyl-CoA acetyltransferase, cytosolic-like [KO:K00626] [EC:2.3.1.9]
119103394  acetyl-CoA acetyltransferase B, mitochondrial-like [KO:K00626] [EC:2.3.1.9]
119103395  LOW QUALITY PROTEIN: acetyl-CoA acetyltransferase B, mitochondrial-like [KO:K00626] [EC:2.3.1.9]
119090436  methylmalonyl-CoA epimerase, mitochondrial-like [KO:K05606] [EC:5.1.99.1]
119090529  methylmalonyl-CoA epimerase, mitochondrial-like [KO:K05606] [EC:5.1.99.1]
119096249  LOW QUALITY PROTEIN: propionyl-CoA carboxylase alpha chain, mitochondrial-like [KO:K01965] [EC:6.4.1.3]
119096250  propionyl-CoA carboxylase alpha chain, mitochondrial-like [KO:K01965] [EC:6.4.1.3]
119097097  propionyl-CoA carboxylase alpha chain, mitochondrial-like [KO:K01965] [EC:6.4.1.3]
119109166  propionyl-CoA carboxylase beta chain, mitochondrial-like [KO:K01966] [EC:6.4.1.3 2.1.3.15]
119109856  LOW QUALITY PROTEIN: propionyl-CoA carboxylase beta chain, mitochondrial-like [KO:K01966] [EC:6.4.1.3 2.1.3.15]
119109687  methylmalonyl-CoA mutase, mitochondrial-like [KO:K01847] [EC:5.4.99.2]
119110183  methylmalonyl-CoA mutase, mitochondrial-like [KO:K01847] [EC:5.4.99.2]
119110627  probable methylmalonyl-CoA mutase, mitochondrial [KO:K01847] [EC:5.4.99.2]
119109542  hydroxyacid oxidase 1-like isoform X1 [KO:K11517] [EC:1.1.3.15]
119109543  peroxisomal (S)-2-hydroxy-acid oxidase GLO3-like [KO:K11517] [EC:1.1.3.15]
119109594  peroxisomal (S)-2-hydroxy-acid oxidase GLO3-like [KO:K11517] [EC:1.1.3.15]
119109595  hydroxyacid oxidase 1-like [KO:K11517] [EC:1.1.3.15]
119109596  hydroxyacid oxidase 1-like [KO:K11517] [EC:1.1.3.15]
119109886  peroxisomal (S)-2-hydroxy-acid oxidase GLO3-like [KO:K11517] [EC:1.1.3.15]
119110737  peroxisomal (S)-2-hydroxy-acid oxidase GLO3-like isoform X1 [KO:K11517] [EC:1.1.3.15]
119107066  catalase-like [KO:K03781] [EC:1.11.1.6]
119107504  catalase-like isoform X1 [KO:K03781] [EC:1.11.1.6]
119104871  glyoxylate reductase/hydroxypyruvate reductase-like [KO:K00049] [EC:1.1.1.79 1.1.1.81]
119091680  glycerol-3-phosphate phosphatase-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
119092026  glycerol-3-phosphate phosphatase-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
119114901  serine--pyruvate aminotransferase, mitochondrial-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
119089539  serine--pyruvate aminotransferase-like isoform X1 [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
119090968  glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
119099905  glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
119093643  glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
119103285  glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
119093765  LOW QUALITY PROTEIN: glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
119102210  serine hydroxymethyltransferase, mitochondrial-like isoform X1 [KO:K00600] [EC:2.1.2.1]
119102641  serine hydroxymethyltransferase, mitochondrial-like [KO:K00600] [EC:2.1.2.1]
119095392  LOW QUALITY PROTEIN: serine hydroxymethyltransferase, cytosolic-like [KO:K00600] [EC:2.1.2.1]
119095400  serine hydroxymethyltransferase, cytosolic-like [KO:K00600] [EC:2.1.2.1]
119112217  glycine dehydrogenase (decarboxylating), mitochondrial-like [KO:K00281] [EC:1.4.4.2]
119109116  aminomethyltransferase, mitochondrial-like [KO:K00605] [EC:2.1.2.10]
119089734  dihydrolipoyl dehydrogenase, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
119089365  glycine cleavage system H protein-like [KO:K02437]
119090504  glycine cleavage system H protein-like [KO:K02437]
119096020  putative hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
119106037  glycerate kinase-like [KO:K11529] [EC:2.7.1.165]
119112206  4-hydroxy-2-oxoglutarate aldolase, mitochondrial-like [KO:K18123] [EC:4.1.3.16]
119104766  kynurenine formamidase-like [KO:K01432] [EC:3.5.1.9]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
ppoi00010  Glycolysis / Gluconeogenesis
ppoi00020  Citrate cycle (TCA cycle)
ppoi00030  Pentose phosphate pathway
ppoi00053  Ascorbate and aldarate metabolism
ppoi00071  Fatty acid degradation
ppoi00230  Purine metabolism
ppoi00250  Alanine, aspartate and glutamate metabolism
ppoi00260  Glycine, serine and threonine metabolism
ppoi00620  Pyruvate metabolism
ppoi00750  Vitamin B6 metabolism
ppoi00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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