KEGG   PATHWAY: prhz03440
Entry
prhz03440                   Pathway                                
Name
Homologous recombination - Pseudomonas rhizophila
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
prhz03440  Homologous recombination
prhz03440

Other DBs
GO: 0000724
Organism
Pseudomonas rhizophila [GN:prhz]
Gene
CRX69_03445  recJ; single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
CRX69_07105  single-stranded DNA-binding protein [KO:K03111]
CRX69_26345  DNA replication/repair protein RecF [KO:K03629]
CRX69_09400  DNA repair protein RecO [KO:K03584]
CRX69_13830  recombination protein RecR [KO:K06187]
CRX69_04090  recA; recombinase RecA [KO:K03553]
CRX69_26495  DNA polymerase I [KO:K02335] [EC:2.7.7.7]
CRX69_09935  Holliday junction branch migration protein RuvA [KO:K03550]
CRX69_09940  Holliday junction branch migration DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
CRX69_09930  crossover junction endodeoxyribonuclease RuvC [KO:K01159] [EC:3.1.21.10]
CRX69_00110  DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
CRX69_07825  transcriptional regulator [KO:K03655] [EC:5.6.2.4]
CRX69_23570  recB; exodeoxyribonuclease V subunit beta [KO:K03582] [EC:3.1.11.5]
CRX69_23575  recC; exodeoxyribonuclease V subunit gamma [KO:K03583] [EC:3.1.11.5]
CRX69_23565  recD; exodeoxyribonuclease V subunit alpha [KO:K03581] [EC:3.1.11.5]
CRX69_03800  DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
CRX69_26340  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
CRX69_13815  hypothetical protein [KO:K02343] [EC:2.7.7.7]
CRX69_07620  DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
CRX69_10995  holB; DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
CRX69_23445  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
CRX69_24125  3'-5' exonuclease [KO:K02342] [EC:2.7.7.7]
CRX69_05810  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
CRX69_16140  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
CRX69_09360  DNA polymerase III subunit chi [KO:K02339] [EC:2.7.7.7]
CRX69_01305  primosomal protein N' [KO:K04066] [EC:5.6.2.4]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
LinkDB

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