KEGG   PATHWAY: pse00630
Entry
pse00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Pseudogulbenkiania sp. NH8B
Class
Metabolism; Carbohydrate metabolism
Pathway map
pse00630  Glyoxylate and dicarboxylate metabolism
pse00630

Module
pse_M00012  Glyoxylate cycle [PATH:pse00630]
pse_M00621  Glycine cleavage system [PATH:pse00630]
Other DBs
GO: 0046487 0043648
Organism
Pseudogulbenkiania sp. NH8B [GN:pse]
Gene
NH8B_0837  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
NH8B_2257  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
NH8B_2997  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
NH8B_1762  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
NH8B_2199  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
NH8B_0834  malate synthase G [KO:K01638] [EC:2.3.3.9]
NH8B_1004  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
NH8B_1011  type II citrate synthase [KO:K01647] [EC:2.3.3.1]
NH8B_2432  acnA; aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
NH8B_2430  acnB; aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
NH8B_1485  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
NH8B_2008  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
NH8B_2779  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
NH8B_2338  acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
NH8B_3503  MaoC domain protein dehydratase [KO:K17865] [EC:4.2.1.55]
NH8B_2960  D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [KO:K12972] [EC:1.1.1.79 1.1.1.81]
NH8B_4089  D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
NH8B_3486  glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
NH8B_2917  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
NH8B_2581  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
NH8B_0203  glnA; glutamate--putrescine ligase [KO:K01915] [EC:6.3.1.2]
NH8B_0527  glnA; glutamate--putrescine ligase [KO:K01915] [EC:6.3.1.2]
NH8B_0801  glnA; glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
NH8B_2308  glnA; glutamine synthetase, catalytic domain [KO:K01915] [EC:6.3.1.2]
NH8B_2751  glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
NH8B_1412  glyA; glycine/serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
NH8B_2479  glyA; glycine/serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
NH8B_1098  glyA; glycine/serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
NH8B_1342  glyA; glycine/serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
NH8B_2218  glyA; glycine/serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
NH8B_2219  gcvP; glycine cleavage system P protein, glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
NH8B_3254  gcvP; glycine cleavage system P protein, glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
NH8B_2217  gcvT; glycine cleavage system T protein, aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
NH8B_3256  gcvT; glycine cleavage system T protein, aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
NH8B_3878  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
NH8B_2292  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
NH8B_1014  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
NH8B_2220  glycine cleavage system H protein [KO:K02437]
NH8B_3255  glycine cleavage system H protein [KO:K02437]
NH8B_0256  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
NH8B_0255  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
NH8B_0254  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
NH8B_0496  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
NH8B_3177  glxK; glycerate kinase [KO:K00865] [EC:2.7.1.165]
NH8B_0252  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
NH8B_0113  KHG/KDPG aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
NH8B_2069  formate dehydrogenase, delta subunit [KO:K00126] [EC:1.17.1.9]
NH8B_1221  formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
NH8B_2071  formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
NH8B_2210  formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
NH8B_2209  formate dehydrogenase, beta subunit [KO:K00124]
NH8B_2125  formate dehydrogenase, beta subunit [KO:K00124]
NH8B_1220  formate dehydrogenase, beta subunit [KO:K00124]
NH8B_2126  formate dehydrogenase, gamma subunit [KO:K00127]
NH8B_2208  formate dehydrogenase, gamma subunit [KO:K00127]
NH8B_0025  arylformamidase [KO:K07130] [EC:3.5.1.9]
NH8B_1152  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
NH8B_1349  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
NH8B_2697  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
NH8B_1379  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
NH8B_3768  N-formylglutamate amidohydrolase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
pse00010  Glycolysis / Gluconeogenesis
pse00020  Citrate cycle (TCA cycle)
pse00030  Pentose phosphate pathway
pse00053  Ascorbate and aldarate metabolism
pse00071  Fatty acid degradation
pse00230  Purine metabolism
pse00250  Alanine, aspartate and glutamate metabolism
pse00260  Glycine, serine and threonine metabolism
pse00620  Pyruvate metabolism
pse00710  Carbon fixation by Calvin cycle
pse00750  Vitamin B6 metabolism
pse00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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