KEGG   PATHWAY: psyn00970
Entry
psyn00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Psychroserpens sp. NJDZ02
Class
Genetic Information Processing; Translation
Pathway map
psyn00970  Aminoacyl-tRNA biosynthesis
psyn00970

Organism
Psychroserpens sp. NJDZ02 [GN:psyn]
Gene
E9099_00550  tRNA-Ala [KO:K14218]
E9099_07690  tRNA-Ala [KO:K14218]
E9099_00575  tRNA-Ala [KO:K14218]
E9099_09895  tRNA-Ala [KO:K14218]
E9099_09920  tRNA-Ala [KO:K14218]
E9099_11360  tRNA-Ala [KO:K14218]
E9099_11385  tRNA-Ala [KO:K14218]
E9099_11560  tRNA-Arg [KO:K14219]
E9099_17600  tRNA-Arg [KO:K14219]
E9099_04200  tRNA-Arg [KO:K14219]
E9099_06280  tRNA-Asn [KO:K14220]
E9099_08730  tRNA-Asp [KO:K14221]
E9099_07095  tRNA-Cys [KO:K14222]
E9099_09115  tRNA-Gln [KO:K14223]
E9099_11335  tRNA-Glu [KO:K14224]
E9099_02520  tRNA-Gly [KO:K14225]
E9099_09490  tRNA-Gly [KO:K14225]
E9099_09765  tRNA-Gly [KO:K14225]
E9099_12980  tRNA-His [KO:K14226]
E9099_00555  tRNA-Ile [KO:K14227]
E9099_00580  tRNA-Ile [KO:K14227]
E9099_09890  tRNA-Ile [KO:K14227]
E9099_09915  tRNA-Ile [KO:K14227]
E9099_11355  tRNA-Ile [KO:K14227]
E9099_11380  tRNA-Ile [KO:K14227]
E9099_09495  tRNA-Leu [KO:K14228]
E9099_08980  tRNA-Leu [KO:K14228]
E9099_00705  tRNA-Leu [KO:K14228]
E9099_05140  tRNA-Leu [KO:K14228]
E9099_00700  tRNA-Lys [KO:K14229]
E9099_00695  tRNA-Lys [KO:K14229]
E9099_03420  tRNA-Met [KO:K14230]
E9099_00345  tRNA-Met [KO:K14230]
E9099_07275  tRNA-Met [KO:K14230]
E9099_04535  tRNA-Phe [KO:K14231]
E9099_12110  tRNA-Pro [KO:K14232]
E9099_17605  tRNA-Pro [KO:K14232]
E9099_18400  tRNA-Ser [KO:K14233]
E9099_17610  tRNA-Ser [KO:K14233]
E9099_04810  tRNA-Ser [KO:K14233]
E9099_02530  tRNA-Thr [KO:K14234]
E9099_02515  tRNA-Thr [KO:K14234]
E9099_02420  tRNA-Thr [KO:K14234]
E9099_02505  tRNA-Trp [KO:K14235]
E9099_01105  tRNA-Tyr [KO:K14236]
E9099_02525  tRNA-Tyr [KO:K14236]
E9099_09935  tRNA-Val [KO:K14237]
E9099_11460  tRNA-Val [KO:K14237]
E9099_07040  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
E9099_07085  glutamine--tRNA ligase/YqeY domain fusion protein [KO:K01886] [EC:6.1.1.18]
E9099_03125  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
E9099_04975  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
E9099_04770  asnS; asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
E9099_05635  glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
E9099_00590  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
E9099_05180  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
E9099_11300  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
E9099_08505  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
E9099_06830  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
E9099_00320  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
E9099_02910  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
E9099_05305  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
E9099_08330  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
E9099_09855  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
E9099_10010  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
E9099_11330  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
E9099_00350  histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
E9099_07935  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
E9099_13195  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
E9099_14415  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
E9099_08610  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
E9099_06610  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
psyn00250  Alanine, aspartate and glutamate metabolism
psyn00260  Glycine, serine and threonine metabolism
psyn00270  Cysteine and methionine metabolism
psyn00290  Valine, leucine and isoleucine biosynthesis
psyn00300  Lysine biosynthesis
psyn00330  Arginine and proline metabolism
psyn00340  Histidine metabolism
psyn00380  Tryptophan metabolism
psyn00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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