KEGG   PATHWAY: pum00061
Entry
pum00061                    Pathway                                
Name
Fatty acid biosynthesis - Pseudomonas umsongensis
Class
Metabolism; Lipid metabolism
Pathway map
pum00061  Fatty acid biosynthesis
pum00061

Module
pum_M00082  Fatty acid biosynthesis, initiation [PATH:pum00061]
pum_M00083  Fatty acid biosynthesis, elongation [PATH:pum00061]
pum_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pum00061]
Other DBs
GO: 0006633
Organism
Pseudomonas umsongensis [GN:pum]
Gene
HGP31_06010  acetyl-CoA carboxylase carboxyltransferase subunit alpha [KO:K01962] [EC:6.4.1.2 2.1.3.15]
HGP31_03360  acetyl-CoA carboxylase biotin carboxyl carrier protein [KO:K02160]
HGP31_19835  biotin carboxyl carrier domain-containing protein [KO:K02160]
HGP31_03355  accC; acetyl-CoA carboxylase biotin carboxylase subunit [KO:K01961] [EC:6.4.1.2 6.3.4.14]
HGP31_19830  acetyl-CoA carboxylase biotin carboxylase subunit [KO:K01961] [EC:6.4.1.2 6.3.4.14]
HGP31_21570  acetyl-CoA carboxylase carboxyltransferase subunit beta [KO:K01963] [EC:6.4.1.2 2.1.3.15]
HGP31_23935  fabD; ACP S-malonyltransferase [KO:K00645] [EC:2.3.1.39]
HGP31_08160  ketoacyl-ACP synthase III [KO:K00648] [EC:2.3.1.180]
HGP31_02415  beta-ketoacyl-[acyl-carrier-protein] synthase family protein [KO:K00647] [EC:2.3.1.41]
HGP31_24215  fabB; beta-ketoacyl-ACP synthase I [KO:K00647] [EC:2.3.1.41]
HGP31_02400  beta-ketoacyl-ACP synthase [KO:K09458] [EC:2.3.1.179]
HGP31_09145  fabF; beta-ketoacyl-ACP synthase II [KO:K09458] [EC:2.3.1.179]
HGP31_23920  fabF; beta-ketoacyl-ACP synthase II [KO:K09458] [EC:2.3.1.179]
HGP31_01540  SDR family oxidoreductase [KO:K00059] [EC:1.1.1.100]
HGP31_02405  fabG; 3-oxoacyl-ACP reductase FabG [KO:K00059] [EC:1.1.1.100]
HGP31_03525  3-oxoacyl-ACP reductase [KO:K00059] [EC:1.1.1.100]
HGP31_15620  SDR family oxidoreductase [KO:K00059] [EC:1.1.1.100]
HGP31_16855  SDR family oxidoreductase [KO:K00059] [EC:1.1.1.100]
HGP31_16865  SDR family oxidoreductase [KO:K00059] [EC:1.1.1.100]
HGP31_18315  SDR family oxidoreductase [KO:K00059] [EC:1.1.1.100]
HGP31_18955  SDR family oxidoreductase [KO:K00059] [EC:1.1.1.100]
HGP31_19055  SDR family oxidoreductase [KO:K00059] [EC:1.1.1.100]
HGP31_19115  SDR family oxidoreductase [KO:K00059] [EC:1.1.1.100]
HGP31_19255  SDR family oxidoreductase [KO:K00059] [EC:1.1.1.100]
HGP31_19270  SDR family oxidoreductase [KO:K00059] [EC:1.1.1.100]
HGP31_19580  SDR family oxidoreductase [KO:K00059] [EC:1.1.1.100]
HGP31_20650  SDR family oxidoreductase [KO:K00059] [EC:1.1.1.100]
HGP31_20720  3-oxoacyl-ACP reductase FabG [KO:K00059] [EC:1.1.1.100]
HGP31_22925  3-oxoacyl-ACP reductase FabG [KO:K00059] [EC:1.1.1.100]
HGP31_23930  fabG; 3-oxoacyl-ACP reductase FabG [KO:K00059] [EC:1.1.1.100]
HGP31_25745  SDR family oxidoreductase [KO:K00059] [EC:1.1.1.100]
HGP31_24210  fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA [KO:K01716] [EC:4.2.1.59 5.3.3.14]
HGP31_05985  fabZ; 3-hydroxyacyl-ACP dehydratase FabZ [KO:K02372] [EC:4.2.1.59]
HGP31_14355  enoyl-ACP reductase [KO:K00208] [EC:1.3.1.9 1.3.1.10]
HGP31_06615  long-chain-fatty-acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
HGP31_06620  long-chain fatty acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
HGP31_24175  AMP-binding protein [KO:K01897] [EC:6.2.1.3]
Compound
C00024  Acetyl-CoA
C00083  Malonyl-CoA
C00154  Palmitoyl-CoA
C00173  Acyl-[acyl-carrier protein]
C00229  Acyl-carrier protein
C00249  Hexadecanoic acid
C00383  Malonate
C00638  Long-chain fatty acid
C00685  3-Oxoacyl-[acyl-carrier protein]
C00693  trans-2,3-Dehydroacyl-[acyl-carrier protein]
C00712  (9Z)-Octadecenoic acid
C01203  Oleoyl-[acyl-carrier protein]
C01209  Malonyl-[acyl-carrier protein]
C01271  (3R)-3-Hydroxyacyl-[acyl-carrier protein]
C01530  Octadecanoic acid
C01571  Decanoic acid
C02679  Dodecanoic acid
C02843  Long-chain acyl-CoA
C03939  Acetyl-[acyl-carrier protein]
C04088  Octadecanoyl-[acyl-carrier protein]
C04180  cis-Dec-3-enoyl-[acp]
C04246  But-2-enoyl-[acyl-carrier protein]
C04618  (3R)-3-Hydroxybutanoyl-[acyl-carrier protein]
C04619  (3R)-3-Hydroxydecanoyl-[acyl-carrier protein]
C04620  (3R)-3-Hydroxyoctanoyl-[acyl-carrier protein]
C04633  (3R)-3-Hydroxypalmitoyl-[acyl-carrier protein]
C04688  (3R)-3-Hydroxytetradecanoyl-[acyl-carrier protein]
C05223  Dodecanoyl-[acyl-carrier protein]
C05744  Acetoacetyl-[acp]
C05745  Butyryl-[acp]
C05746  3-Oxohexanoyl-[acp]
C05747  (3R)-3-Hydroxyhexanoyl-[acyl-carrier protein]
C05748  trans-Hex-2-enoyl-[acp]
C05749  Hexanoyl-[acp]
C05750  3-Oxooctanoyl-[acp]
C05751  trans-Oct-2-enoyl-[acp]
C05752  Octanoyl-[acp]
C05753  3-Oxodecanoyl-[acp]
C05754  trans-Dec-2-enoyl-[acp]
C05755  Decanoyl-[acp]
C05756  3-Oxododecanoyl-[acp]
C05757  (3R)-3-Hydroxydodecanoyl-[acyl-carrier protein]
C05758  trans-Dodec-2-enoyl-[acp]
C05759  3-Oxotetradecanoyl-[acp]
C05760  trans-Tetradec-2-enoyl-[acp]
C05761  Tetradecanoyl-[acp]
C05762  3-Oxohexadecanoyl-[acp]
C05763  trans-Hexadec-2-enoyl-[acp]
C05764  Hexadecanoyl-[acp]
C06423  Octanoic acid
C06424  Tetradecanoic acid
C08362  (9Z)-Hexadecenoic acid
C16219  3-Oxostearoyl-[acp]
C16220  (3R)-3-Hydroxyoctadecanoyl-[acyl-carrier protein]
C16221  (2E)-Octadecenoyl-[acp]
C16520  Hexadecenoyl-[acyl-carrier protein]
C20683  Long-chain acyl-[acyl-carrier protein]
C20794  n-7 Unsaturated acyl-[acyl-carrier protein]
Reference
PMID:12061798
  Authors
Salas JJ, Ohlrogge JB.
  Title
Characterization of substrate specificity of plant FatA and FatB acyl-ACP thioesterases.
  Journal
Arch Biochem Biophys 403:25-34 (2002)
DOI:10.1016/S0003-9861(02)00017-6
Reference
PMID:12518017
  Authors
Zhang YM, Marrakchi H, White SW, Rock CO.
  Title
The application of computational methods to explore the diversity and structure of bacterial fatty acid synthase.
  Journal
J Lipid Res 44:1-10 (2003)
DOI:10.1194/jlr.R200016-JLR200
Reference
PMID:11337402
  Authors
Voelker T, Kinney AJ.
  Title
VARIATIONS IN THE BIOSYNTHESIS OF SEED-STORAGE LIPIDS.
  Journal
Annu Rev Plant Physiol Plant Mol Biol 52:335-361 (2001)
DOI:10.1146/annurev.arplant.52.1.335
Reference
PMID:17573542
  Authors
Barker GC, Larson TR, Graham IA, Lynn JR, King GJ.
  Title
Novel insights into seed fatty acid synthesis and modification pathways from genetic diversity and quantitative trait Loci analysis of the Brassica C genome.
  Journal
Plant Physiol 144:1827-42 (2007)
DOI:10.1104/pp.107.096172
Reference
PMID:30201289
  Authors
Bowman CE, Wolfgang MJ
  Title
Role of the malonyl-CoA synthetase ACSF3 in mitochondrial metabolism.
  Journal
Adv Biol Regul 71:34-40 (2019)
DOI:10.1016/j.jbior.2018.09.002
Reference
PMID:25203508
  Authors
Venkatesan R, Sah-Teli SK, Awoniyi LO, Jiang G, Prus P, Kastaniotis AJ, Hiltunen JK, Wierenga RK, Chen Z
  Title
Insights into mitochondrial fatty acid synthesis from the structure of heterotetrameric 3-ketoacyl-ACP reductase/3R-hydroxyacyl-CoA dehydrogenase.
  Journal
Nat Commun 5:4805 (2014)
DOI:10.1038/ncomms5805
Reference
PMID:19686777
  Authors
Hiltunen JK, Chen Z, Haapalainen AM, Wierenga RK, Kastaniotis AJ
  Title
Mitochondrial fatty acid synthesis--an adopted set of enzymes making a pathway of major importance for the cellular metabolism.
  Journal
Prog Lipid Res 49:27-45 (2010)
DOI:10.1016/j.plipres.2009.08.001
Reference
PMID:27553474
  Authors
Kastaniotis AJ, Autio KJ, Keratar JM, Monteuuis G, Makela AM, Nair RR, Pietikainen LP, Shvetsova A, Chen Z, Hiltunen JK
  Title
Mitochondrial fatty acid synthesis, fatty acids and mitochondrial physiology.
  Journal
Biochim Biophys Acta Mol Cell Biol Lipids 1862:39-48 (2017)
DOI:10.1016/j.bbalip.2016.08.011
Related
pathway
pum00020  Citrate cycle (TCA cycle)
pum00071  Fatty acid degradation
pum00410  beta-Alanine metabolism
pum00561  Glycerolipid metabolism
pum00564  Glycerophospholipid metabolism
pum00620  Pyruvate metabolism
pum00785  Lipoic acid metabolism
KO pathway
ko00061   
LinkDB

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