KEGG   PATHWAY: qsu00630
Entry
qsu00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Quercus suber (cork oak)
Class
Metabolism; Carbohydrate metabolism
Pathway map
qsu00630  Glyoxylate and dicarboxylate metabolism
qsu00630

Module
qsu_M00012  Glyoxylate cycle [PATH:qsu00630]
qsu_M00621  Glycine cleavage system [PATH:qsu00630]
Other DBs
GO: 0046487 0043648
Organism
Quercus suber (cork oak) [GN:qsu]
Gene
111988425  isocitrate lyase isoform X1 [KO:K01637] [EC:4.1.3.1]
111988428  isocitrate lyase-like [KO:K01637] [EC:4.1.3.1]
112024027  isocitrate lyase-like [KO:K01637] [EC:4.1.3.1]
112027345  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal [KO:K01895] [EC:6.2.1.1]
112007287  acetate/butyrate--CoA ligase AAE7, peroxisomal [KO:K01913] [EC:6.2.1.1 6.2.1.2]
112013364  malate synthase, glyoxysomal [KO:K01638] [EC:2.3.3.9]
111995761  malate dehydrogenase, cytoplasmic-like isoform X1 [KO:K00025] [EC:1.1.1.37]
112005668  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
112039751  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
112018526  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
112018528  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
111991581  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
111992185  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
112022309  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
111998695  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
112016385  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
112006482  citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
112011005  citrate synthase, glyoxysomal [KO:K01647] [EC:2.3.3.1]
112028079  citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
112000315  aconitate hydratase, cytoplasmic-like [KO:K01681] [EC:4.2.1.3]
112022786  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
112034847  aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
112015380  probable acetyl-CoA acetyltransferase, cytosolic 2 isoform X1 [KO:K00626] [EC:2.3.1.9]
111992289  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
112018048  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like [KO:K11517] [EC:1.1.3.15]
112019851  peroxisomal (S)-2-hydroxy-acid oxidase GLO3-like isoform X1 [KO:K11517] [EC:1.1.3.15]
112005387  (S)-2-hydroxy-acid oxidase GLO1-like [KO:K11517] [EC:1.1.3.15]
112020837  peroxisomal (S)-2-hydroxy-acid oxidase isoform X1 [KO:K11517] [EC:1.1.3.15]
112032193  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like isoform X1 [KO:K11517] [EC:1.1.3.15]
112032195  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like [KO:K11517] [EC:1.1.3.15]
112027895  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like [KO:K11517] [EC:1.1.3.15]
112027897  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like isoform X1 [KO:K11517] [EC:1.1.3.15]
112027899  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like isoform X1 [KO:K11517] [EC:1.1.3.15]
112027900  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like isoform X1 [KO:K11517] [EC:1.1.3.15]
112031912  catalase isozyme 3-like isoform X1 [KO:K03781] [EC:1.11.1.6]
112031913  catalase isozyme 1 [KO:K03781] [EC:1.11.1.6]
112016589  catalase isozyme 1-like [KO:K03781] [EC:1.11.1.6]
111989319  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
111989321  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
112000924  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
112000946  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
112017778  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
112039785  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
112039818  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
112039830  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
112021170  LOW QUALITY PROTEIN: hydroxyphenylpyruvate reductase-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
111995115  glyoxylate/succinic semialdehyde reductase 2, chloroplastic isoform X1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
111996469  glyoxylate/succinic semialdehyde reductase 1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
111994567  glycerate dehydrogenase isoform X1 [KO:K15893] [EC:1.1.1.29]
112007248  phosphoglycolate phosphatase 2 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
112039519  phosphoglycolate phosphatase 1B, chloroplastic-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
112025335  ribulose bisphosphate carboxylase small chain clone 512-like [KO:K01602] [EC:4.1.1.39]
112027225  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
112019627  alanine--glyoxylate aminotransferase 1-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
111997815  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
112010088  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
112004190  ferredoxin-dependent glutamate synthase, chloroplastic [KO:K00284] [EC:1.4.7.1]
112019764  glutamine synthetase leaf isozyme, chloroplastic [KO:K01915] [EC:6.3.1.2]
111990755  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
112010719  glutamine synthetase cytosolic isozyme 2 [KO:K01915] [EC:6.3.1.2]
112009067  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
112012306  serine hydroxymethyltransferase 4 [KO:K00600] [EC:2.1.2.1]
111997596  serine hydroxymethyltransferase, mitochondrial-like [KO:K00600] [EC:2.1.2.1]
111992070  serine hydroxymethyltransferase, mitochondrial isoform X1 [KO:K00600] [EC:2.1.2.1]
111987008  serine hydroxymethyltransferase 3, chloroplastic [KO:K00600] [EC:2.1.2.1]
112023241  serine hydroxymethyltransferase 7 [KO:K00600] [EC:2.1.2.1]
111986992  LOW QUALITY PROTEIN: glycine dehydrogenase (decarboxylating), mitochondrial-like [KO:K00281] [EC:1.4.4.2]
112016896  glycine dehydrogenase (decarboxylating), mitochondrial-like [KO:K00281] [EC:1.4.4.2]
112025641  glycine dehydrogenase (decarboxylating), mitochondrial-like [KO:K00281] [EC:1.4.4.2]
111997569  aminomethyltransferase, mitochondrial-like [KO:K00605] [EC:2.1.2.10]
112031672  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
112007313  dihydrolipoyl dehydrogenase 2, chloroplastic-like isoform X1 [KO:K00382] [EC:1.8.1.4]
112022356  dihydrolipoyl dehydrogenase 1, mitochondrial [KO:K00382] [EC:1.8.1.4]
112024387  dihydrolipoyl dehydrogenase 2, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
112005463  glycine cleavage system H protein, mitochondrial isoform X1 [KO:K02437]
112031759  glycine cleavage system H protein 2, mitochondrial-like isoform X1 [KO:K02437]
112030934  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
112032030  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
112032033  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
112023818  glycine cleavage system H protein 2, mitochondrial [KO:K02437]
112023799  uncharacterized protein LOC112023799 [KO:K02437]
112027124  D-glycerate 3-kinase, chloroplastic isoform X1 [KO:K15918] [EC:2.7.1.31]
112033748  formate dehydrogenase, mitochondrial [KO:K00122] [EC:1.17.1.9]
112028044  formyltetrahydrofolate deformylase 1, mitochondrial-like isoform X1 [KO:K01433] [EC:3.5.1.10]
111983038  uncharacterized protein LOC111983038 isoform X1 [KO:K01455] [EC:3.5.1.49]
112031840  oxalate--CoA ligase-like [KO:K22133] [EC:6.2.1.8]
111998999  oxalate--CoA ligase-like [KO:K22133] [EC:6.2.1.8]
111999002  oxalate--CoA ligase-like [KO:K22133] [EC:6.2.1.8]
112004964  oxalate--CoA ligase-like [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
qsu00010  Glycolysis / Gluconeogenesis
qsu00020  Citrate cycle (TCA cycle)
qsu00030  Pentose phosphate pathway
qsu00053  Ascorbate and aldarate metabolism
qsu00071  Fatty acid degradation
qsu00230  Purine metabolism
qsu00250  Alanine, aspartate and glutamate metabolism
qsu00260  Glycine, serine and threonine metabolism
qsu00620  Pyruvate metabolism
qsu00710  Carbon fixation in photosynthetic organisms
qsu00750  Vitamin B6 metabolism
qsu00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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