KEGG   PATHWAY: rai00970
Entry
rai00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Riemerella anatipestifer ATCC 11845 = DSM 15868
Class
Genetic Information Processing; Translation
Pathway map
rai00970  Aminoacyl-tRNA biosynthesis
rai00970

Organism
Riemerella anatipestifer ATCC 11845 = DSM 15868 [GN:rai]
Gene
RA0C_1828  trnA; tRNA-Ala [KO:K14218]
RA0C_0466  trnA; tRNA-Ala [KO:K14218]
RA0C_0373  trnR; tRNA-Arg [KO:K14219]
RA0C_0606  trnR; tRNA-Arg [KO:K14219]
RA0C_0790  trnR; tRNA-Arg [KO:K14219]
RA0C_1517  trnN; tRNA-Asn [KO:K14220]
RA0C_0700  trnD; tRNA-Asp [KO:K14221]
RA0C_1069  trnG; tRNA-Gly [KO:K14222]
RA0C_1860  trnQ; tRNA-Gln [KO:K14223]
RA0C_1118  trnQ; tRNA-Glu [KO:K14224]
RA0C_1119  trnQ; tRNA-Glu [KO:K14224]
RA0C_1789  trnG; tRNA-Gly [KO:K14225]
RA0C_1569  trnG; tRNA-Gly [KO:K14225]
RA0C_1204  trnH; tRNA-His [KO:K14226]
RA0C_1827  trnI; tRNA-Ile [KO:K14227]
RA0C_1570  trnL; tRNA-Leu [KO:K14228]
RA0C_2016  trnL; tRNA-Leu [KO:K14228]
RA0C_1568  trnL; tRNA-Leu [KO:K14228]
RA0C_0717  trnK; tRNA-Lys [KO:K14229]
RA0C_0768  trnM; tRNA-Met [KO:K14230]
RA0C_0644  trnM; tRNA-Met [KO:K14230]
RA0C_0819  trnM; tRNA-Met [KO:K14230]
RA0C_0855  trnF; tRNA-Phe [KO:K14231]
RA0C_0791  trnP; tRNA-Pro [KO:K14232]
RA0C_0670  trnS; tRNA-Ser [KO:K14233]
RA0C_0108  trnV; tRNA-Val [KO:K14233]
RA0C_0792  trnS; tRNA-Ser [KO:K14233]
RA0C_1787  trnT; tRNA-Thr [KO:K14234]
RA0C_1790  trnT; tRNA-Thr [KO:K14234]
RA0C_1793  trnW; tRNA-Trp [KO:K14235]
RA0C_1788  trnY; tRNA-Tyr [KO:K14236]
RA0C_1572  trnV; tRNA-Val [KO:K14237]
RA0C_1573  trnV; tRNA-Val [KO:K14237]
RA0C_1091  glutamyl-tRNA synthetase [KO:K09698] [EC:6.1.1.24]
RA0C_0654  glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
RA0C_1844  alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
RA0C_0400  aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
RA0C_1834  asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
RA0C_1655  glycyl-tRNA synthetase [KO:K01880] [EC:6.1.1.14]
RA0C_0449  ser-tRNA(thr) hydrolase/threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
RA0C_1222  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
RA0C_1714  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
RA0C_0610  methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
RA0C_0865  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
RA0C_0924  valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
RA0C_1213  leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
RA0C_1394  isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
RA0C_0461  lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
RA0C_1012  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
RA0C_0910  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
RA0C_0563  histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
RA0C_1931  phenylalanyl-tRNA synthetase, alpha subunit [KO:K01889] [EC:6.1.1.20]
RA0C_0592  phenylalanyl-tRNA synthetase beta subunit [KO:K01890] [EC:6.1.1.20]
RA0C_0886  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
RA0C_1537  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
rai00250  Alanine, aspartate and glutamate metabolism
rai00260  Glycine, serine and threonine metabolism
rai00270  Cysteine and methionine metabolism
rai00290  Valine, leucine and isoleucine biosynthesis
rai00300  Lysine biosynthesis
rai00330  Arginine and proline metabolism
rai00380  Tryptophan metabolism
rai00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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