KEGG   PATHWAY: rct00630
Entry
rct00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Rhizobium croatiense
Class
Metabolism; Carbohydrate metabolism
Pathway map
rct00630  Glyoxylate and dicarboxylate metabolism
rct00630

Module
rct_M00012  Glyoxylate cycle [PATH:rct00630]
rct_M00621  Glycine cleavage system [PATH:rct00630]
Other DBs
GO: 0046487 0043648
Organism
Rhizobium croatiense [GN:rct]
Gene
PYR68_01890  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
PYR68_17745  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
PYR68_19600  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
PYR68_19945  malate synthase G [KO:K01638] [EC:2.3.3.9]
PYR68_18445  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
PYR68_08245  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
PYR68_09295  citrate synthase/methylcitrate synthase [KO:K01647] [EC:2.3.3.1]
PYR68_18720  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
PYR68_01160  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
PYR68_19100  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
PYR68_19105  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
PYR68_06405  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
PYR68_09530  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
PYR68_09560  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
PYR68_02295  FAD-linked oxidase C-terminal domain-containing protein [KO:K00104] [EC:1.1.99.14]
PYR68_02300  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
PYR68_02305  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
PYR68_20440  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
PYR68_20655  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
PYR68_02480  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
PYR68_10210  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
PYR68_01850  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
PYR68_05010  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
PYR68_08915  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
PYR68_12880  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
PYR68_13915  glutamine synthetase beta-grasp domain-containing protein [KO:K01915] [EC:6.3.1.2]
PYR68_05850  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
PYR68_09615  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
PYR68_09605  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
PYR68_08305  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
PYR68_18395  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
PYR68_09610  gcvH; glycine cleavage system protein GcvH [KO:K02437]
PYR68_15220  TIM barrel protein [KO:K01816] [EC:5.3.1.22]
PYR68_10485  NAD(P)-dependent oxidoreductase [KO:K00042] [EC:1.1.1.60]
PYR68_07325  glycerate kinase [KO:K11529] [EC:2.7.1.165]
PYR68_16760  2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
PYR68_18205  formate dehydrogenase subunit delta [KO:K00126] [EC:1.17.1.9]
PYR68_18215  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
PYR68_18220  NADH-quinone oxidoreductase subunit NuoF [KO:K00124]
PYR68_18225  formate dehydrogenase subunit gamma [KO:K00127]
PYR68_20885  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
rct00010  Glycolysis / Gluconeogenesis
rct00020  Citrate cycle (TCA cycle)
rct00030  Pentose phosphate pathway
rct00053  Ascorbate and aldarate metabolism
rct00071  Fatty acid degradation
rct00230  Purine metabolism
rct00250  Alanine, aspartate and glutamate metabolism
rct00260  Glycine, serine and threonine metabolism
rct00620  Pyruvate metabolism
rct00710  Carbon fixation by Calvin cycle
rct00750  Vitamin B6 metabolism
rct00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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