KEGG   PATHWAY: reh00030
Entry
reh00030                    Pathway                                
Name
Pentose phosphate pathway - Cupriavidus necator H16
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
reh00030  Pentose phosphate pathway
reh00030

Module
reh_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:reh00030]
reh_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:reh00030]
reh_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:reh00030]
Other DBs
GO: 0006098
Organism
Cupriavidus necator H16 [GN:reh]
Gene
H16_A1502  pgi1; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
H16_B1502  pgi2; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
H16_B1501  zwf2; Glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
H16_A0316  zwf1; Glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
H16_B2566  zwf3; Glucose-6-phosphate 1-dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
H16_B2565  pgl; 6-Phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
H16_B1391  cbbE2; Ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
H16_A3317  rpe; Ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
PHG423  cbbEp; ribulose-5-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
H16_A3147  tktA; Transketolase [KO:K00615] [EC:2.2.1.1]
H16_B1388  cbbT2; Transketolase [KO:K00615] [EC:2.2.1.1]
PHG420  cbbTp; transketolase [KO:K00615] [EC:2.2.1.1]
H16_A2346  tal; Transaldolase [KO:K00616] [EC:2.2.1.2]
H16_A2345  rpiA; Ribose 5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
H16_A2885  manB2; Phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
H16_A1847  manB1; Phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
H16_B1291  phnN; uncharacterized component of phosphonate metabolism [KO:K05774] [EC:2.7.4.23]
H16_A0372  prsA; Ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
H16_A1178  edd1; phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
H16_B2567  edd2; phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
H16_B1213  eda; 2-Keto-3-deoxy-6-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
H16_A3012  gnl1; Gluconolactonase [KO:K01053] [EC:3.1.1.17]
H16_B1441  gnl3; Gluconolactonase [KO:K01053] [EC:3.1.1.17]
H16_B0345  gnl2; Gluconolactonase [KO:K01053] [EC:3.1.1.17]
H16_A2586  h16_A2586; lactate dehydrogenase or related dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
H16_B1813  kguD; Putative 2-Ketogluconate-6-phosphate reductase [KO:K00032] [EC:1.1.1.43]
H16_A1179  gntK; gluconate kinase [KO:K00851] [EC:2.7.1.12]
H16_B1212  kdgK; 2-Keto-3-deoxygluconate kinase [KO:K00874] [EC:2.7.1.45]
H16_B1812  kguK; Putative 2-Ketogluconate kinase [KO:K00874] [EC:2.7.1.45]
H16_A3601  ttuD1; hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
H16_A2132  ttuD2; hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
H16_A0478  ldhA; dehydrogenase related to lactate dehydrogenases [KO:K11529] [EC:2.7.1.165]
H16_B0278  fbaB; Fructose-bisphosphate aldolase class-I [KO:K01623] [EC:4.1.2.13]
H16_A0568  fba; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
H16_B1384  cbbA2; Fructose-1,6-/sedoheptulose-1,7-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
PHG416  cbbAp; fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
H16_A0999  fbp; Fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
PHG422  cbbFp; fructose-1,6-bisphosphate [KO:K01086] [EC:3.1.3.11 3.1.3.37]
H16_B1390  cbbF2; Fructose-1,6-/sedoheptulose-1,7-bisphosphatase [KO:K01086] [EC:3.1.3.11 3.1.3.37]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
reh00010  Glycolysis / Gluconeogenesis
reh00040  Pentose and glucuronate interconversions
reh00052  Galactose metabolism
reh00230  Purine metabolism
reh00240  Pyrimidine metabolism
reh00340  Histidine metabolism
reh00630  Glyoxylate and dicarboxylate metabolism
reh00750  Vitamin B6 metabolism
KO pathway
ko00030   
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