KEGG   PATHWAY: rel00630
Entry
rel00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Rhizobium etli bv. mimosae Mim1
Class
Metabolism; Carbohydrate metabolism
Pathway map
rel00630  Glyoxylate and dicarboxylate metabolism
rel00630

Module
rel_M00012  Glyoxylate cycle [PATH:rel00630]
rel_M00621  Glycine cleavage system [PATH:rel00630]
rel_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rel00630]
Other DBs
GO: 0046487 0043648
Organism
Rhizobium etli bv. mimosae Mim1 [GN:rel]
Gene
REMIM1_CH00727  aceA-1; isocitrate lyase 1 [KO:K01637] [EC:4.1.3.1]
REMIM1_PF00915  aceA-2; isocitrate lyase 2 [KO:K01637] [EC:4.1.3.1]
REMIM1_CH04230  acsA; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
REMIM1_CH03856  AMP-dependent synthetase/ligase protein [KO:K01895] [EC:6.2.1.1]
REMIM1_CH00053  glcB; malate synthase G [KO:K01638] [EC:2.3.3.9]
REMIM1_CH03984  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
REMIM1_CH02192  citrate synthase protein [KO:K01647] [EC:2.3.3.1]
REMIM1_CH02193  citA; citrate synthase [KO:K01647] [EC:2.3.3.1]
REMIM1_CH01984  gltA-1; citrate synthase 1 [KO:K01647] [EC:2.3.3.1]
REMIM1_PF00913  gltA-2; citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
REMIM1_CH04037  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
REMIM1_CH00568  fadA; acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
REMIM1_PB00069  acetyl-CoA acetyltransferase protein [KO:K00626] [EC:2.3.1.9]
REMIM1_PF00015  vraB; acetyl-CoA C-acetyltransferase VraB [KO:K00626] [EC:2.3.1.9]
REMIM1_CH04115  phbA-1; acetyl-CoA acetyltransferase 1 [KO:K00626] [EC:2.3.1.9]
REMIM1_PC00128  phbA-2; acetyl-CoA acetyltransferase 2 [KO:K00626] [EC:2.3.1.9]
REMIM1_PF00886  bktB; beta-ketothiolase [KO:K00626] [EC:2.3.1.9]
REMIM1_PF00895  thiolase protein [KO:K00626] [EC:2.3.1.9]
REMIM1_CH04116  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
REMIM1_CH01641  methylmalonyl-CoA epimerase protein [KO:K05606] [EC:5.1.99.1]
REMIM1_CH02235  pccA; propionyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
REMIM1_CH02241  pccB; propionyl-CoA carboxylase beta subunit [KO:K01966] [EC:6.4.1.3 2.1.3.15]
REMIM1_PF00841  acetyl/propionyl-CoA carboxylase alpha subunit protein [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
REMIM1_PA00165  bhbA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
REMIM1_PF00839  glcD-2; glycolate oxidase subunit GlcD 2 [KO:K00104] [EC:1.1.99.14]
REMIM1_CH00817  glcD-1; glycolate oxidase subunit GlcD 1 [KO:K00104] [EC:1.1.99.14]
REMIM1_CH00818  glcE-1; glycolate oxidase FAD-binding subunit GlcE 1 [KO:K11472] [EC:1.1.99.14]
REMIM1_PF00838  glcE-2; glycolate oxidase FAD-binding subunit GlcE 2 [KO:K11472] [EC:1.1.99.14]
REMIM1_CH00819  glcF-1; glycolate oxidase iron-sulfur subunit GlcF 1 [KO:K11473] [EC:1.1.99.14]
REMIM1_PF00837  glcF-2; glycolate oxidase iron-sulfur subunit GlcF 2 [KO:K11473] [EC:1.1.99.14]
REMIM1_CH00144  gyaR-1; glyoxylate reductase 1 [KO:K00015] [EC:1.1.1.26]
REMIM1_CH00187  ghrA-1; bifunctional glyoxylate/hydroxypyruvate reductase A 1 [KO:K12972] [EC:1.1.1.79 1.1.1.81]
REMIM1_PF00578  ghrA-2; bifunctional glyoxylate/hydroxypyruvate reductase A 2 [KO:K12972] [EC:1.1.1.79 1.1.1.81]
REMIM1_CH00858  phosphoglycolate phosphatase protein [KO:K01091] [EC:3.1.3.18]
REMIM1_CH02244  phosphoglycolate phosphatase protein [KO:K01091] [EC:3.1.3.18]
REMIM1_CH02396  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
REMIM1_PF00835  sgaA; serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
REMIM1_CH01322  glutamine synthetase GlnA-like protein [KO:K01915] [EC:6.3.1.2]
REMIM1_CH00719  glutamine synthetase GlnA-like protein [KO:K01915] [EC:6.3.1.2]
REMIM1_CH02110  glnA; glutamine synthetase 1 [KO:K01915] [EC:6.3.1.2]
REMIM1_CH02937  glutamine synthetase protein [KO:K01915] [EC:6.3.1.2]
REMIM1_CH03153  glnII; glutamine synthetase 2 [KO:K01915] [EC:6.3.1.2]
REMIM1_CH01523  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
REMIM1_CH02253  gcvP; glycine dehydrogenase (decarboxylating) [KO:K00281] [EC:1.4.4.2]
REMIM1_CH02251  gcvT; aminomethyltransferase (glycine-cleavage system T protein) [KO:K00605] [EC:2.1.2.10]
REMIM1_PD00428  glycine-cleavage system T protein [KO:K00605] [EC:2.1.2.10]
REMIM1_PD00437  glycine-cleavage system T protein [KO:K00605] [EC:2.1.2.10]
REMIM1_CH01997  lpdA-1; dihydrolipoamide dehydrogenase 1 [KO:K00382] [EC:1.8.1.4]
REMIM1_PF00816  lpdA-2; dihydrolipoamide dehydrogenase 2 [KO:K00382] [EC:1.8.1.4]
REMIM1_PB00074  lpdV; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
REMIM1_CH03974  dihydrolipoamide dehydrogenase protein [KO:K00382] [EC:1.8.1.4]
REMIM1_CH02252  gcvH; glycine-cleavage system protein H [KO:K02437]
REMIM1_CH03426  hydroxypyruvate isomerase protein [KO:K01816] [EC:5.3.1.22]
REMIM1_CH02370  hydroxypyruvate isomerase protein [KO:K01816] [EC:5.3.1.22]
REMIM1_CH02450  NAD-binding 6-phosphogluconate dehydrogenase protein [KO:K00042] [EC:1.1.1.60]
REMIM1_CH01839  ttuD; hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
REMIM1_PF00574  ttuC; trifunctional D-malate dehydrogenase/tartrate dehydrogenase/tartrate decarboxylase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
REMIM1_CH03712  eda; bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
REMIM1_CH03945  FdsD family formate dehydrogenase delta subunit protein [KO:K00126] [EC:1.17.1.9]
REMIM1_CH03947  formate dehydrogenase alpha subunit protein [KO:K00123] [EC:1.17.1.9]
REMIM1_CH03948  formate dehydrogenase beta subunit protein [KO:K00124]
REMIM1_CH03949  formate dehydrogenase gamma subunit protein [KO:K00127]
REMIM1_PF00547  alpha/beta hydrolase family protein [KO:K01432] [EC:3.5.1.9]
REMIM1_CH00230  purU-1; formyltetrahydrofolate deformylase 1 [KO:K01433] [EC:3.5.1.10]
REMIM1_PD00439  purU-2; formyltetrahydrofolate deformylase 2 [KO:K01433] [EC:3.5.1.10]
REMIM1_PD00072  hutG; formiminoglutamase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
rel00010  Glycolysis / Gluconeogenesis
rel00020  Citrate cycle (TCA cycle)
rel00030  Pentose phosphate pathway
rel00053  Ascorbate and aldarate metabolism
rel00071  Fatty acid degradation
rel00230  Purine metabolism
rel00250  Alanine, aspartate and glutamate metabolism
rel00260  Glycine, serine and threonine metabolism
rel00620  Pyruvate metabolism
rel00710  Carbon fixation by Calvin cycle
rel00750  Vitamin B6 metabolism
rel00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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