KEGG   PATHWAY: rhs02024
Entry
rhs02024                    Pathway                                
Name
Quorum sensing - Rhodococcus fascians PBTS 2
Description
Quorum sensing (QS) is a regulatory system that allows bacteria to share information about cell density and adjust gene expression accordingly. All QS bacteria produce and release chemical signal molecules called autoinducers (AIs) that increase in concentration as a function of cell density. The most commonly studied AIs belong to one of the following three categories: acylated homoserine lactones, also referred to as AI-1, used by Gram-negative bacteria; peptide signals, used by Gram-positive bacteria; and AI-2, used by both Gram-negative and Gram-positive bacteria. QS can be divided into at least 4 steps: production of AIs by the bacterial cell; release of AIs, either actively or passively, into the surrounding environment; recognition of AIs by specific receptors; and leading to changes in gene regulation once they exceed a threshold concentration. The processes controlled by QS include virulence, competence, conjugation, antibiotic production, motility, sporulation, and biofilm formation.
Class
Cellular Processes; Cellular community - prokaryotes
Pathway map
rhs02024  Quorum sensing
rhs02024

Other DBs
GO: 0009372
Organism
Rhodococcus fascians PBTS 2 [GN:rhs]
Gene
A3Q41_04225  trpE; Anthranilate synthase component 1 [KO:K01657] [EC:4.1.3.27]
A3Q41_02613  aroG_1; Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive [KO:K01626] [EC:2.5.1.54]
A3Q41_04320  aroG_2; Phospho-2-dehydro-3-deoxyheptonate aldolase AroG [KO:K01626] [EC:2.5.1.54]
A3Q41_02711  phzD; putative isochorismatase [KO:K20261] [EC:3.3.2.15]
A3Q41_01696  kdpE_1; Transcriptional regulatory protein KdpE [KO:K07667]
A3Q41_01569  gadA; Glutamate decarboxylase alpha [KO:K01580] [EC:4.1.1.15]
A3Q41_05042  hypothetical protein [KO:K07344]
A3Q41_01064  hypothetical protein [KO:K02055]
A3Q41_01066  phnV_1; Putative 2-aminoethylphosphonate transport system permease protein PhnV [KO:K02053]
A3Q41_01065  hypothetical protein [KO:K02054]
A3Q41_01067  cysA_1; Sulfate/thiosulfate import ATP-binding protein CysA [KO:K02052]
A3Q41_01973  hypothetical protein [KO:K01999]
A3Q41_04205  hypothetical protein [KO:K01999]
A3Q41_01975  livH_3; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997]
A3Q41_04201  livH_4; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997]
A3Q41_04202  hypothetical protein [KO:K01998]
A3Q41_01974  livH_2; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01998]
A3Q41_01977  lptB_3; Lipopolysaccharide export system ATP-binding protein LptB [KO:K01995]
A3Q41_04203  lptB_4; Lipopolysaccharide export system ATP-binding protein LptB [KO:K01995]
A3Q41_04204  livF_2; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996]
A3Q41_01976  livF_1; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996]
A3Q41_02946  aiiA_1; N-acyl homoserine lactonase [KO:K13075] [EC:3.1.1.81]
A3Q41_00162  Long-chain-fatty-acid--CoA ligase FadD15 [KO:K01897] [EC:6.2.1.3]
A3Q41_02998  lcfB_8; Long-chain-fatty-acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
A3Q41_04329  Long-chain-fatty-acid--CoA ligase FadD15 [KO:K01897] [EC:6.2.1.3]
A3Q41_01259  lcfB_4; Long-chain-fatty-acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
A3Q41_00360  yhfT_1; putative acyl--CoA ligase YhfT [KO:K01897] [EC:6.2.1.3]
A3Q41_00975  crp; cAMP receptor protein [KO:K10914]
A3Q41_03907  ribD_2; Riboflavin biosynthesis protein RibD [KO:K11752] [EC:3.5.4.26 1.1.1.193]
A3Q41_00965  oppA; Oligopeptide-binding protein OppA [KO:K15580]
A3Q41_00964  dppB_1; Dipeptide transport system permease protein DppB [KO:K15581]
A3Q41_00963  oppC; Oligopeptide transport system permease protein OppC [KO:K15582]
A3Q41_00962  gsiA_2; Glutathione import ATP-binding protein GsiA [KO:K10823 K15583]
A3Q41_00743  nikA_1; Nickel-binding periplasmic protein [KO:K02035]
A3Q41_01594  nikA_2; Nickel-binding periplasmic protein [KO:K02035]
A3Q41_02939  hypothetical protein [KO:K02035]
A3Q41_01883  dppA; Periplasmic dipeptide transport protein [KO:K02035]
A3Q41_02564  ddpA; putative D,D-dipeptide-binding periplasmic protein DdpA [KO:K02035]
A3Q41_03859  putative lipoprotein [KO:K02035]
A3Q41_00742  gsiC_1; Glutathione transport system permease protein GsiC [KO:K02033]
A3Q41_01595  nikB; Nickel transport system permease protein NikB [KO:K02033 K02034]
A3Q41_02937  gsiC_3; Glutathione transport system permease protein GsiC [KO:K02033]
A3Q41_01882  gsiC_2; Glutathione transport system permease protein GsiC [KO:K02033]
A3Q41_02565  dppB_2; Dipeptide transport system permease protein DppB [KO:K02033]
A3Q41_00741  ddpC; putative D,D-dipeptide transport system permease protein DdpC [KO:K02034]
A3Q41_01881  gsiD_1; Glutathione transport system permease protein GsiD [KO:K02034]
A3Q41_02566  gsiD_2; Glutathione transport system permease protein GsiD [KO:K02034]
A3Q41_02936  oppD_2; Oligopeptide transport ATP-binding protein OppD [KO:K02031 K02034]
A3Q41_00740  gsiA_1; Glutathione import ATP-binding protein GsiA [KO:K02031 K02032]
A3Q41_01592  ddpD; putative D,D-dipeptide transport ATP-binding protein DdpD [KO:K02031]
A3Q41_02567  gsiA_4; Glutathione import ATP-binding protein GsiA [KO:K02031 K02032]
A3Q41_01880  oppD_1; Oligopeptide transport ATP-binding protein OppD [KO:K02031]
A3Q41_01879  oppF_1; Oligopeptide transport ATP-binding protein OppF [KO:K02032]
A3Q41_01548  yidC_1; Membrane protein insertase YidC [KO:K03217]
A3Q41_03271  yidC_2; Membrane protein insertase YidC [KO:K03217]
A3Q41_00463  secE; Protein translocase subunit SecE [KO:K03073]
A3Q41_03919  secG; putative protein-export membrane protein SecG [KO:K03075]
A3Q41_03182  secY; Protein translocase subunit SecY [KO:K03076]
A3Q41_03856  hypothetical protein [KO:K03210]
A3Q41_03382  secA_1; Protein translocase subunit SecA [KO:K03070] [EC:7.4.2.8]
A3Q41_04255  secA_2; Protein translocase subunit SecA [KO:K03070] [EC:7.4.2.8]
A3Q41_03580  ftsY; Signal recognition particle receptor FtsY [KO:K03110]
A3Q41_03585  ffh; Signal recognition particle protein [KO:K03106] [EC:3.6.5.4]
Compound
C00007  Oxygen
C00009  Orthophosphate
C00059  Sulfate
C00232  Succinate semialdehyde
C00334  4-Aminobutanoate
C00547  L-Noradrenaline
C00788  L-Adrenaline
C01019  L-Fucose
C11837  N-Butyryl-L-homoserine lactone
C11841  N-(3-Oxooctanoyl)homoserine lactone
C11844  N-Heptanoylhomoserine lactone
C11845  N-(3-Hydroxy-7-cis-tetradecenoyl)homoserine lactone
C11848  2-Heptyl-3-hydroxy-quinolone
C16421  AI-2
C16463  3',5'-Cyclic diGMP
C16640  CAI-1
C18049  N-Acyl-L-homoserine lactone
C18206  cis-11-Methyl-2-dodecenoic acid
C20643  2-Heptyl-4(1H)-quinolone
C20677  N-(4-Coumaroyl)-L-homoserine lactone
C20959  (4S)-4-Hydroxy-5-phosphooxypentane-2,3-dione
C21195  N-(3-Hydroxybutanoyl)-L-homoserine lactone
C21197  N-Hexanoyl-L-homoserine lactone
C21198  N-(3-Oxohexanoyl)-L-homoserine lactone
C21199  N-Octanoyl-L-homoserine lactone
C21200  N-3-Hydroxyoctanoyl-L-homoserine lactone
C21201  N-3-Oxo-dodecanoyl-L-homoserine lactone
C21202  cis-2-Dodecenoic acid
C21220  AIP-1
C21221  CSP
C21222  CSP
C21223  Blp
C21224  SHP2
C21225  SHP3
C21226  cCF10
C21227  iCF10
C21228  cAD1
C21229  iAD1
C21230  ComX pheromone
C21231  PhrA pentapeptide
C21232  PhrC pentapeptide
C21233  PhrE pentapeptide
C21234  PhrF pentapeptide
C21235  PhrG pentapeptide
C21236  PhrH pentapeptide
C21237  PhrK pentapeptide
C21238  NprX peptide
C21239  PapR peptide
C21241  AIP-2
C21242  AIP-3
C21243  AIP-4
C21244  AgrD peptide
C21245  AgrD1 peptide
C21246  GBAP
C21382  R-THMF
Reference
  Authors
Pereira CS, Thompson JA, Xavier KB
  Title
AI-2-mediated signalling in bacteria.
  Journal
FEMS Microbiol Rev 37:156-81 (2013)
DOI:10.1111/j.1574-6976.2012.00345.x
Reference
  Authors
Verma SC, Miyashiro T
  Title
Quorum sensing in the squid-Vibrio symbiosis.
  Journal
Int J Mol Sci 14:16386-401 (2013)
DOI:10.3390/ijms140816386
Reference
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Norsworthy AN, Visick KL
  Title
Gimme shelter: how Vibrio fischeri successfully navigates an animal's multiple environments.
  Journal
Front Microbiol 4:356 (2013)
DOI:10.3389/fmicb.2013.00356
Reference
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Papaioannou E, Utari PD, Quax WJ
  Title
Choosing an appropriate infection model to study quorum sensing inhibition in Pseudomonas infections.
  Journal
Int J Mol Sci 14:19309-40 (2013)
DOI:10.3390/ijms140919309
Reference
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Heeb S, Fletcher MP, Chhabra SR, Diggle SP, Williams P, Camara M
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Quinolones: from antibiotics to autoinducers.
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FEMS Microbiol Rev 35:247-74 (2011)
DOI:10.1111/j.1574-6976.2010.00247.x
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The formation of biofilms by Pseudomonas aeruginosa: a review of the natural and synthetic compounds interfering with control mechanisms.
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Biomed Res Int 2015:759348 (2015)
DOI:10.1155/2015/759348
Reference
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Whiteley M, Greenberg EP
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Promoter specificity elements in Pseudomonas aeruginosa quorum-sensing-controlled genes.
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J Bacteriol 183:5529-34 (2001)
DOI:10.1128/JB.183.19.5529-5534.2001
Reference
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Phenazine-1-carboxamide production in the biocontrol strain Pseudomonas chlororaphis PCL1391 is regulated by multiple factors secreted into the growth medium.
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Mol Plant Microbe Interact 14:969-79 (2001)
DOI:10.1094/MPMI.2001.14.8.969
Reference
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Hughes DT, Clarke MB, Yamamoto K, Rasko DA, Sperandio V
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The QseC adrenergic signaling cascade in Enterohemorrhagic E. coli (EHEC).
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PLoS Pathog 5:e1000553 (2009)
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Reference
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Njoroge J, Sperandio V
  Title
Enterohemorrhagic Escherichia coli virulence regulation by two bacterial adrenergic kinases, QseC and QseE.
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Infect Immun 80:688-703 (2012)
DOI:10.1128/IAI.05921-11
Reference
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Pacheco AR, Curtis MM, Ritchie JM, Munera D, Waldor MK, Moreira CG, Sperandio V
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Nature 492:113-7 (2012)
DOI:10.1038/nature11623
Reference
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Hirakawa H, Harwood CS, Pechter KB, Schaefer AL, Greenberg EP
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Antisense RNA that affects Rhodopseudomonas palustris quorum-sensing signal receptor expression.
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Proc Natl Acad Sci U S A 109:12141-6 (2012)
DOI:10.1073/pnas.1200243109
Reference
  Authors
Danino VE, Wilkinson A, Edwards A, Downie JA
  Title
Recipient-induced transfer of the symbiotic plasmid pRL1JI in Rhizobium leguminosarum bv. viciae is regulated by a quorum-sensing relay.
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Mol Microbiol 50:511-25 (2003)
DOI:10.1046/j.1365-2958.2003.03699.x
Reference
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Antonie Van Leeuwenhoek 81:397-407 (2002)
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Reference
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Analysis of quorum-sensing-dependent control of rhizosphere-expressed (rhi) genes in Rhizobium leguminosarum bv. viciae.
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J Bacteriol 181:3816-23 (1999)
DOI:10.1128/JB.181.12.3816-3823.1999
Reference
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  Title
Functions and regulation of quorum-sensing in Agrobacterium tumefaciens.
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Front Plant Sci 5:14 (2014)
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Reference
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In planta fitness-cost of the Atu4232-regulon encoding for a selective GABA-binding sensor in Agrobacterium.
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Commun Integr Biol 6:e23692 (2013)
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Reference
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Quorum sensing in Erwinia species.
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Anal Bioanal Chem 387:415-23 (2007)
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Reference
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Quorum sensing, virulence and secondary metabolite production in plant soft-rotting bacteria.
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Philos Trans R Soc Lond B Biol Sci 362:1165-83 (2007)
DOI:10.1098/rstb.2007.2042
Reference
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  Title
Identification and characterization of three novel EsaI/EsaR quorum-sensing controlled stewartan exopolysaccharide biosynthetic genes in Pantoea stewartii ssp. stewartii.
  Journal
Mol Microbiol 74:903-13 (2009)
DOI:10.1111/j.1365-2958.2009.06906.x
Reference
PMID:7665477
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  Title
Capsular polysaccharide biosynthesis and pathogenicity in Erwinia stewartii require induction by an N-acylhomoserine lactone autoinducer.
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J Bacteriol 177:5000-8 (1995)
DOI:10.1128/JB.177.17.5000-5008.1995
Reference
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O'Grady EP, Viteri DF, Malott RJ, Sokol PA
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Reciprocal regulation by the CepIR and CciIR quorum sensing systems in Burkholderia cenocepacia.
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BMC Genomics 10:441 (2009)
DOI:10.1186/1471-2164-10-441
Reference
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Malott RJ, Baldwin A, Mahenthiralingam E, Sokol PA
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Characterization of the cciIR quorum-sensing system in Burkholderia cenocepacia.
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Infect Immun 73:4982-92 (2005)
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Deng Y, Schmid N, Wang C, Wang J, Pessi G, Wu D, Lee J, Aguilar C, Ahrens CH, Chang C, Song H, Eberl L, Zhang LH
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Cis-2-dodecenoic acid receptor RpfR links quorum-sensing signal perception with regulation of virulence through cyclic dimeric guanosine monophosphate turnover.
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Proc Natl Acad Sci U S A 109:15479-84 (2012)
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Reference
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Suppiger A, Schmid N, Aguilar C, Pessi G, Eberl L
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Two quorum sensing systems control biofilm formation and virulence in members of the Burkholderia cepacia complex.
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Virulence 4:400-9 (2013)
DOI:10.4161/viru.25338
Reference
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Listening to a new language: DSF-based quorum sensing in Gram-negative bacteria.
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Chem Rev 111:160-73 (2011)
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Communication with a growing family: diffusible signal factor (DSF) signaling in bacteria.
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Trends Microbiol 19:145-52 (2011)
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Reference
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Kim J, Kim JG, Kang Y, Jang JY, Jog GJ, Lim JY, Kim S, Suga H, Nagamatsu T, Hwang I
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Quorum sensing and the LysR-type transcriptional activator ToxR regulate toxoflavin biosynthesis and transport in Burkholderia glumae.
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Mol Microbiol 54:921-34 (2004)
DOI:10.1111/j.1365-2958.2004.04338.x
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Kim J, Kang Y, Choi O, Jeong Y, Jeong JE, Lim JY, Kim M, Moon JS, Suga H, Hwang I
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Regulation of polar flagellum genes is mediated by quorum sensing and FlhDC in Burkholderia glumae.
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Mol Microbiol 64:165-79 (2007)
DOI:10.1111/j.1365-2958.2007.05646.x
Reference
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  Title
Quorum sensing in Chromobacterium violaceum: DNA recognition and gene regulation by the CviR receptor.
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J Bacteriol 193:3871-8 (2011)
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Reference
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Chen G, Swem LR, Swem DL, Stauff DL, O'Loughlin CT, Jeffrey PD, Bassler BL, Hughson FM
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A strategy for antagonizing quorum sensing.
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Mol Cell 42:199-209 (2011)
DOI:10.1016/j.molcel.2011.04.003
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Regulation of long-chain N-acyl-homoserine lactones in Agrobacterium vitis.
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J Bacteriol 188:2173-83 (2006)
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Reference
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LasR receptor for detection of long-chain quorum-sensing signals: identification of N-acyl-homoserine lactones encoded by the avsI locus of Agrobacterium vitis.
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Curr Microbiol 62:101-10 (2011)
DOI:10.1007/s00284-010-9679-1
Reference
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Le KY, Otto M
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Quorum-sensing regulation in staphylococci-an overview.
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Front Microbiol 6:1174 (2015)
DOI:10.3389/fmicb.2015.01174
Reference
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Queck SY, Jameson-Lee M, Villaruz AE, Bach TH, Khan BA, Sturdevant DE, Ricklefs SM, Li M, Otto M
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RNAIII-independent target gene control by the agr quorum-sensing system: insight into the evolution of virulence regulation in Staphylococcus aureus.
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Mol Cell 32:150-8 (2008)
DOI:10.1016/j.molcel.2008.08.005
Reference
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Darkoh C, DuPont HL, Norris SJ, Kaplan HB
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Toxin synthesis by Clostridium difficile is regulated through quorum signaling.
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MBio 6:e02569 (2015)
DOI:10.1128/mBio.02569-14
Reference
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Vidal JE, Shak JR, Canizalez-Roman A
  Title
The CpAL quorum sensing system regulates production of hemolysins CPA and PFO to build Clostridium perfringens biofilms.
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Infect Immun 83:2430-42 (2015)
DOI:10.1128/IAI.00240-15
Reference
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Ohtani K, Yuan Y, Hassan S, Wang R, Wang Y, Shimizu T
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Virulence gene regulation by the agr system in Clostridium perfringens.
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J Bacteriol 191:3919-27 (2009)
DOI:10.1128/JB.01455-08
Reference
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Li YH, Tian X
  Title
Quorum sensing and bacterial social interactions in biofilms.
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Sensors (Basel) 12:2519-38 (2012)
DOI:10.3390/s120302519
Reference
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Berg KH, Biornstad TJ, Johnsborg O, Havarstein LS
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Properties and biological role of streptococcal fratricins.
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Appl Environ Microbiol 78:3515-22 (2012)
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Comparing the cariogenic species Streptococcus sobrinus and S. mutans on whole genome level.
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J Oral Microbiol 6:26189 (2014)
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Reference
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Jimenez JC, Federle MJ
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Quorum sensing in group A Streptococcus.
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Front Cell Infect Microbiol 4:127 (2014)
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Reference
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Peptide pheromone signaling in Streptococcus and Enterococcus.
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FEMS Microbiol Rev 38:473-92 (2014)
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Reference
PMID:9680220
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The group A streptococcal dipeptide permease (Dpp) is involved in the uptake of essential amino acids and affects the expression of cysteine protease.
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Reference
PMID:8885277
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Reference
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Anbalagan S, Dmitriev A, McShan WM, Dunman PM, Chaussee MS
  Title
Growth phase-dependent modulation of Rgg binding specificity in Streptococcus pyogenes.
  Journal
J Bacteriol 194:3961-71 (2012)
DOI:10.1128/JB.06709-11
Reference
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Clewell DB
  Title
Tales of conjugation and sex pheromones: A plasmid and enterococcal odyssey.
  Journal
Mob Genet Elements 1:38-54 (2011)
DOI:10.4161/mge.1.1.15409
Reference
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Wardal E, Sadowy E, Hryniewicz W
  Title
Complex nature of enterococcal pheromone-responsive plasmids.
  Journal
Pol J Microbiol 59:79-87 (2010)
Reference
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Roux A, Payne SM, Gilmore MS
  Title
Microbial telesensing: probing the environment for friends, foes, and food.
  Journal
Cell Host Microbe 6:115-24 (2009)
DOI:10.1016/j.chom.2009.07.004
Reference
  Authors
Slamti L, Perchat S, Huillet E, Lereclus D
  Title
Quorum sensing in Bacillus thuringiensis is required for completion of a full infectious cycle in the insect.
  Journal
Toxins (Basel) 6:2239-55 (2014)
DOI:10.3390/toxins6082239
Reference
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Lopez D, Kolter R
  Title
Extracellular signals that define distinct and coexisting cell fates in Bacillus subtilis.
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FEMS Microbiol Rev 34:134-49 (2010)
DOI:10.1111/j.1574-6976.2009.00199.x
Reference
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Stephenson S, Mueller C, Jiang M, Perego M
  Title
Molecular analysis of Phr peptide processing in Bacillus subtilis.
  Journal
J Bacteriol 185:4861-71 (2003)
DOI:10.1128/JB.185.16.4861-4871.2003
Reference
  Authors
Lanigan-Gerdes S, Dooley AN, Faull KF, Lazazzera BA
  Title
Identification of subtilisin, Epr and Vpr as enzymes that produce CSF, an extracellular signalling peptide of Bacillus subtilis.
  Journal
Mol Microbiol 65:1321-33 (2007)
DOI:10.1111/j.1365-2958.2007.05869.x
Reference
  Authors
Kleerebezem M
  Title
Quorum sensing control of lantibiotic production; nisin and subtilin autoregulate their own biosynthesis.
  Journal
Peptides 25:1405-14 (2004)
DOI:10.1016/j.peptides.2003.10.021
Reference
  Authors
Rutherford ST, Bassler BL
  Title
Bacterial quorum sensing: its role in virulence and possibilities for its control.
  Journal
Cold Spring Harb Perspect Med 2:a012427 (2012)
DOI:10.1101/cshperspect.a012427
Reference
  Authors
LaSarre B, Federle MJ
  Title
Exploiting quorum sensing to confuse bacterial pathogens.
  Journal
Microbiol Mol Biol Rev 77:73-111 (2013)
DOI:10.1128/MMBR.00046-12
Reference
  Authors
Sifri CD
  Title
Healthcare epidemiology: quorum sensing: bacteria talk sense.
  Journal
Clin Infect Dis 47:1070-6 (2008)
DOI:10.1086/592072
Related
pathway
rhs00405  Phenazine biosynthesis
rhs02040  Flagellar assembly
KO pathway
ko02024   
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