KEGG   PATHWAY: rim00010
Entry
rim00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Roseburia intestinalis M50/1
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
rim00010  Glycolysis / Gluconeogenesis
rim00010

Module
rim_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rim00010]
rim_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rim00010]
rim_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rim00010]
rim_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rim00010]
Other DBs
GO: 0006096 0006094
Organism
Roseburia intestinalis M50/1 [GN:rim]
Gene
ROI_01400  glucokinase [KO:K25026] [EC:2.7.1.2]
ROI_01310  Transcriptional regulator/sugar kinase [KO:K25026] [EC:2.7.1.2]
ROI_06920  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
ROI_37250  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
ROI_40970  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
ROI_13400  Uncharacterized protein conserved in bacteria [KO:K04041] [EC:3.1.3.11]
ROI_30080  fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist [KO:K01624] [EC:4.1.2.13]
ROI_38920  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
ROI_38900  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
ROI_38910  3-phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
ROI_32090  Fructose-2,6-bisphosphatase [KO:K01834] [EC:5.4.2.11]
ROI_38940  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
ROI_15370  enolase [KO:K01689] [EC:4.2.1.11]
ROI_38650  enolase [KO:K01689] [EC:4.2.1.11]
ROI_29080  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
ROI_19500  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
ROI_40260  Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [KO:K00169] [EC:1.2.7.1]
ROI_40270  2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family [KO:K00172] [EC:1.2.7.1]
ROI_19110  pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric [KO:K03737] [EC:1.2.7.1 1.2.7.-]
ROI_01790  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
ROI_25220  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
ROI_39060  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
ROI_34030  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
ROI_36270  alpha-phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
ROI_22220  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
rim00020  Citrate cycle (TCA cycle)
rim00030  Pentose phosphate pathway
rim00500  Starch and sucrose metabolism
rim00620  Pyruvate metabolism
rim00640  Propanoate metabolism
rim00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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