KEGG   PATHWAY: rim00240
Entry
rim00240                    Pathway                                
Name
Pyrimidine metabolism - Roseburia intestinalis M50/1
Class
Metabolism; Nucleotide metabolism
Pathway map
rim00240  Pyrimidine metabolism
rim00240

Module
rim_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:rim00240]
Other DBs
GO: 0006220 0006213
Organism
Roseburia intestinalis M50/1 [GN:rim]
Gene
ROI_30610  carbamoyl-phosphate synthase, large subunit [KO:K01955] [EC:6.3.5.5]
ROI_30600  carbamoyl-phosphate synthase, small subunit [KO:K01956] [EC:6.3.5.5]
ROI_28180  aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
ROI_28190  Aspartate carbamoyltransferase, regulatory subunit [KO:K00610]
ROI_09110  dihydroorotase [KO:K01465] [EC:3.5.2.3]
ROI_09130  dihydroorotate dehydrogenase (subfamily 1) family protein [KO:K17828] [EC:1.3.1.14]
ROI_09120  2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases [KO:K02823]
ROI_08780  orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
ROI_13830  orotidine-5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
ROI_21360  uridylate kinase [KO:K09903] [EC:2.7.4.22]
ROI_12580  MAF protein [KO:K06287] [EC:3.6.1.-]
ROI_29970  CTP synthase [KO:K01937] [EC:6.3.4.2]
ROI_21940  cytidylate kinase [KO:K00945] [EC:2.7.4.25]
ROI_23110  hypothetical protein [KO:K00945] [EC:2.7.4.25]
ROI_28250  Uridine kinase [KO:K00876] [EC:2.7.1.48]
ROI_24930  uridine kinase [KO:K00876] [EC:2.7.1.48]
ROI_34500  5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [KO:K11751] [EC:3.1.3.5 3.6.1.45]
ROI_34400  5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
ROI_34060  uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
ROI_34460  5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [KO:K01119] [EC:3.1.4.16 3.1.3.6]
ROI_22730  thymidine phosphorylase [KO:K00756] [EC:2.4.2.2]
ROI_22190  cytidine deaminase [KO:K01489] [EC:3.5.4.5]
ROI_28460  anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
ROI_34070  Deoxycytidylate deaminase [KO:K01493] [EC:3.5.4.12]
ROI_11260  deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
ROI_22860  Predicted alternative thymidylate synthase [KO:K03465] [EC:2.1.1.148]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
rim00030  Pentose phosphate pathway
rim00220  Arginine biosynthesis
rim00250  Alanine, aspartate and glutamate metabolism
rim00280  Valine, leucine and isoleucine degradation
rim00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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