KEGG   PATHWAY: rko00970
Entry
rko00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Rhodococcus koreensis
Class
Genetic Information Processing; Translation
Pathway map
rko00970  Aminoacyl-tRNA biosynthesis
rko00970

Organism
Rhodococcus koreensis [GN:rko]
Gene
JWS14_30865  tRNA-Ala [KO:K14218]
JWS14_34835  tRNA-Ala [KO:K14218]
JWS14_19890  tRNA-Ala [KO:K14218]
JWS14_07190  tRNA-Arg [KO:K14219]
JWS14_07695  tRNA-Arg [KO:K14219]
JWS14_22540  tRNA-Arg [KO:K14219]
JWS14_11830  tRNA-Arg [KO:K14219]
JWS14_06280  tRNA-Asn [KO:K14220]
JWS14_26980  tRNA-Asp [KO:K14221]
JWS14_37040  tRNA-Cys [KO:K14222]
JWS14_31330  tRNA-Gln [KO:K14223]
JWS14_35215  tRNA-Gln [KO:K14223]
JWS14_26975  tRNA-Glu [KO:K14224]
JWS14_35220  tRNA-Glu [KO:K14224]
JWS14_07080  tRNA-Gly [KO:K14225]
JWS14_37030  tRNA-Gly [KO:K14225]
JWS14_37045  tRNA-Gly [KO:K14225]
JWS14_29500  tRNA-Gly [KO:K14225]
JWS14_38685  tRNA-Gly [KO:K14225]
JWS14_07290  tRNA-His [KO:K14226]
JWS14_19885  tRNA-Ile [KO:K14227]
JWS14_31620  tRNA-Leu [KO:K14228]
JWS14_04670  tRNA-Leu [KO:K14228]
JWS14_05200  tRNA-Leu [KO:K14228]
JWS14_19985  tRNA-Leu [KO:K14228]
JWS14_26965  tRNA-Lys [KO:K14229]
JWS14_07300  tRNA-Lys [KO:K14229]
JWS14_06270  tRNA-Ile [KO:K14230]
JWS14_10155  tRNA-Met [KO:K14230]
JWS14_12255  tRNA-Met [KO:K14230]
JWS14_34725  tRNA-Met [KO:K14230]
JWS14_41235  tRNA-Ile [KO:K14230]
JWS14_42980  tRNA-Ile [KO:K14230]
JWS14_26985  tRNA-Phe [KO:K14231]
JWS14_04815  tRNA-Pro [KO:K14232]
JWS14_23355  tRNA-Pro [KO:K14232]
JWS14_07075  tRNA-Pro [KO:K14232]
JWS14_22485  tRNA-Ser [KO:K14233]
JWS14_22685  tRNA-Ser [KO:K14233]
JWS14_22535  tRNA-Ser [KO:K14233]
JWS14_22835  tRNA-Ser [KO:K14233]
JWS14_23575  tRNA-Thr [KO:K14234]
JWS14_26120  tRNA-Thr [KO:K14234]
JWS14_10160  tRNA-Thr [KO:K14234]
JWS14_10135  tRNA-Trp [KO:K14235]
JWS14_10165  tRNA-Tyr [KO:K14236]
JWS14_37025  tRNA-Val [KO:K14237]
JWS14_37035  tRNA-Val [KO:K14237]
JWS14_37050  tRNA-Val [KO:K14237]
JWS14_06190  tRNA-Val [KO:K14237]
JWS14_22785  gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS [KO:K01885] [EC:6.1.1.17]
JWS14_35210  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
JWS14_21000  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
JWS14_22900  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
JWS14_24955  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
JWS14_35115  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
JWS14_47395  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
JWS14_35145  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
JWS14_35110  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
JWS14_37350  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
JWS14_37320  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
JWS14_06325  glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
JWS14_37065  threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
JWS14_22115  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
JWS14_24115  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
JWS14_31000  methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
JWS14_40460  class I tRNA ligase family protein [KO:K01874] [EC:6.1.1.10]
JWS14_26080  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
JWS14_37495  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
JWS14_06815  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
JWS14_19600  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
JWS14_05605  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
JWS14_20115  lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX [KO:K04567] [EC:6.1.1.6]
JWS14_23895  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
JWS14_07675  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
JWS14_35865  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
JWS14_37195  histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
JWS14_05005  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
JWS14_05000  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
JWS14_04920  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
JWS14_33955  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
rko00250  Alanine, aspartate and glutamate metabolism
rko00260  Glycine, serine and threonine metabolism
rko00270  Cysteine and methionine metabolism
rko00290  Valine, leucine and isoleucine biosynthesis
rko00300  Lysine biosynthesis
rko00330  Arginine and proline metabolism
rko00340  Histidine metabolism
rko00380  Tryptophan metabolism
rko00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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