KEGG   PATHWAY: rmp00030
Entry
rmp00030                    Pathway                                
Name
Pentose phosphate pathway - Rhipicephalus microplus (southern cattle tick)
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
rmp00030  Pentose phosphate pathway
rmp00030

Module
rmp_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rmp00030]
rmp_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rmp00030]
rmp_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rmp00030]
rmp_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rmp00030]
Other DBs
GO: 0006098
Organism
Rhipicephalus microplus (southern cattle tick) [GN:rmp]
Gene
119176347  glucose-6-phosphate isomerase-like [KO:K01810] [EC:5.3.1.9]
119174797  glucose-6-phosphate 1-dehydrogenase-like isoform X1 [KO:K00036] [EC:1.1.1.49 1.1.1.363]
119177208  6-phosphogluconolactonase-like [KO:K01057] [EC:3.1.1.31]
119175604  LOW QUALITY PROTEIN: 6-phosphogluconate dehydrogenase, decarboxylating-like [KO:K00033] [EC:1.1.1.44 1.1.1.343]
119172403  LOW QUALITY PROTEIN: ribulose-phosphate 3-epimerase-like [KO:K01783] [EC:5.1.3.1]
119174528  transketolase-like isoform X1 [KO:K00615] [EC:2.2.1.1]
119164582  probable transaldolase [KO:K00616] [EC:2.2.1.2]
119176203  ribose-5-phosphate isomerase-like isoform X1 [KO:K01807] [EC:5.3.1.6]
119167552  sedoheptulokinase-like [KO:K11214] [EC:2.7.1.14]
119164321  deoxyribose-phosphate aldolase-like [KO:K01619] [EC:4.1.2.4]
119164126  ribokinase-like isoform X1 [KO:K00852] [EC:2.7.1.15]
119181323  LOW QUALITY PROTEIN: phosphoglucomutase-1-like [KO:K01835] [EC:5.4.2.2]
119169973  phosphoglucomutase-2-like [KO:K15779] [EC:5.4.2.2 5.4.2.7]
119169974  phosphoglucomutase-2-like [KO:K15779] [EC:5.4.2.2 5.4.2.7]
119178058  ribose-phosphate pyrophosphokinase 2 [KO:K00948] [EC:2.7.6.1]
119163167  regucalcin-like [KO:K01053] [EC:3.1.1.17]
119163170  regucalcin-like [KO:K01053] [EC:3.1.1.17]
119163171  regucalcin-like [KO:K01053] [EC:3.1.1.17]
119163473  LOW QUALITY PROTEIN: regucalcin-like [KO:K01053] [EC:3.1.1.17]
119164860  regucalcin-like [KO:K01053] [EC:3.1.1.17]
119165563  regucalcin-like [KO:K01053] [EC:3.1.1.17]
119173510  glycerate kinase-like isoform X1 [KO:K11529] [EC:2.7.1.165]
119176078  fructose-bisphosphate aldolase A-like isoform X1 [KO:K01623] [EC:4.1.2.13]
119169688  LOW QUALITY PROTEIN: ATP-dependent 6-phosphofructokinase-like [KO:K00850] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
rmp00010  Glycolysis / Gluconeogenesis
rmp00040  Pentose and glucuronate interconversions
rmp00052  Galactose metabolism
rmp00230  Purine metabolism
rmp00240  Pyrimidine metabolism
rmp00340  Histidine metabolism
rmp00630  Glyoxylate and dicarboxylate metabolism
rmp00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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