KEGG   PATHWAY: rqi00970
Entry
rqi00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Rhodococcus qingshengii
Class
Genetic Information Processing; Translation
Pathway map
rqi00970  Aminoacyl-tRNA biosynthesis
rqi00970

Organism
Rhodococcus qingshengii [GN:rqi]
Gene
C1M55_11880  tRNA-Ala [KO:K14218]
C1M55_00065  tRNA-Ala [KO:K14218]
C1M55_22095  tRNA-Ala [KO:K14218]
C1M55_01580  tRNA-Arg [KO:K14219]
C1M55_19010  tRNA-Arg [KO:K14219]
C1M55_19495  tRNA-Arg [KO:K14219]
C1M55_22670  tRNA-Arg [KO:K14219]
C1M55_18225  tRNA-Asn [KO:K14220]
C1M55_24050  tRNA-Asp [KO:K14221]
C1M55_21355  tRNA-Cys [KO:K14222]
C1M55_13685  tRNA-Cys [KO:K14222]
C1M55_19590  tRNA-Cys [KO:K14222]
C1M55_14440  tRNA-Cys [KO:K14222]
C1M55_21695  tRNA-Gln [KO:K14223]
C1M55_12545  tRNA-Gln [KO:K14223]
C1M55_12550  tRNA-Glu [KO:K14224]
C1M55_24055  tRNA-Glu [KO:K14224]
C1M55_14430  tRNA-Gly [KO:K14225]
C1M55_18820  tRNA-Gly [KO:K14225]
C1M55_14445  tRNA-Gly [KO:K14225]
C1M55_06330  tRNA-Gly [KO:K14225]
C1M55_20830  tRNA-His [KO:K14226]
C1M55_28235  tRNA-His [KO:K14226]
C1M55_19135  tRNA-His [KO:K14226]
C1M55_00060  tRNA-Ile [KO:K14227]
C1M55_21515  tRNA-Leu [KO:K14228]
C1M55_16030  tRNA-Leu [KO:K14228]
C1M55_16630  tRNA-Leu [KO:K14228]
C1M55_19205  tRNA-Leu [KO:K14228]
C1M55_00185  tRNA-Leu [KO:K14228]
C1M55_16025  tRNA-Leu [KO:K14228]
C1M55_19155  tRNA-Lys [KO:K14229]
C1M55_19165  tRNA-Lys [KO:K14229]
C1M55_24075  tRNA-Lys [KO:K14229]
C1M55_26565  tRNA-Met [KO:K14230]
C1M55_18210  tRNA-Met [KO:K14230]
C1M55_08660  tRNA-Met [KO:K14230]
C1M55_11350  tRNA-Met [KO:K14230]
C1M55_24045  tRNA-Phe [KO:K14231]
C1M55_18815  tRNA-Pro [KO:K14232]
C1M55_16230  tRNA-Pro [KO:K14232]
C1M55_02600  tRNA-Pro [KO:K14232]
C1M55_01335  tRNA-Ser [KO:K14233]
C1M55_01575  tRNA-Ser [KO:K14233]
C1M55_01675  tRNA-Ser [KO:K14233]
C1M55_02055  tRNA-Ser [KO:K14233]
C1M55_08655  tRNA-Thr [KO:K14234]
C1M55_04875  tRNA-Thr [KO:K14234]
C1M55_02870  tRNA-Thr [KO:K14234]
C1M55_08680  tRNA-Trp [KO:K14235]
C1M55_08650  tRNA-Tyr [KO:K14236]
C1M55_14425  tRNA-Val [KO:K14237]
C1M55_14450  tRNA-Val [KO:K14237]
C1M55_14435  tRNA-Val [KO:K14237]
C1M55_18060  tRNA-Val [KO:K14237]
C1M55_01995  tRNA glutamyl-Q(34) synthetase GluQRS [KO:K01885] [EC:6.1.1.17]
C1M55_12540  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
C1M55_12440  Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
C1M55_20970  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
C1M55_12470  Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
C1M55_12435  Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
C1M55_14870  alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
C1M55_14845  aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
C1M55_18285  glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
C1M55_14460  threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
C1M55_04180  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
C1M55_01010  serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
C1M55_03825  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
C1M55_22000  methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
C1M55_15030  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
C1M55_04825  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
C1M55_18730  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
C1M55_30590  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
C1M55_17440  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
C1M55_00365  lysS; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX [KO:K04567] [EC:6.1.1.6]
C1M55_03585  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
C1M55_19475  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
C1M55_13240  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
C1M55_14625  histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
C1M55_16440  phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
C1M55_16435  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
C1M55_16335  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
C1M55_10150  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
rqi00250  Alanine, aspartate and glutamate metabolism
rqi00260  Glycine, serine and threonine metabolism
rqi00270  Cysteine and methionine metabolism
rqi00290  Valine, leucine and isoleucine biosynthesis
rqi00300  Lysine biosynthesis
rqi00330  Arginine and proline metabolism
rqi00340  Histidine metabolism
rqi00380  Tryptophan metabolism
rqi00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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