KEGG   PATHWAY: rso00030
Entry
rso00030                    Pathway                                
Name
Pentose phosphate pathway - Ralstonia pseudosolanacearum GMI1000
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
rso00030  Pentose phosphate pathway
rso00030

Module
rso_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rso00030]
rso_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rso00030]
rso_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:rso00030]
Other DBs
GO: 0006098
Organism
Ralstonia pseudosolanacearum GMI1000 [GN:rso]
Gene
RSc1719  pgi; probable glucose-6-phosphate isomerase (gpi) (phosphoglucoseisomerase) (pgi) (phosphohexose isomerase) (phi). transmembrane protein [KO:K01810] [EC:5.3.1.9]
RSp1559  zwf; probable glucose-6-phosphate 1-dehydrogenase oxidoreductase protein [KO:K00036] [EC:1.1.1.49 1.1.1.363]
RSp1558  pgl; probable 6-phosphogluconolactonase oxidoreductase protein [KO:K01057] [EC:3.1.1.31]
RSc0049  probable 3-carboxymuconate cyclase protein [KO:K07404] [EC:3.1.1.31]
RSp0183  probable 3-carboxymuconate cyclase protein [KO:K07404] [EC:3.1.1.31]
RSc2879  rpe; probable ribulose-phosphate 3-epimerase protein [KO:K01783] [EC:5.1.3.1]
RSc2750  tktA; probable transketolase protein [KO:K00615] [EC:2.2.1.1]
RSc1231  tal; probable transaldolase protein [KO:K00616] [EC:2.2.1.2]
RSc1232  rpiA; probable ribose-5-phosphate isomerase a (phosphoriboisomerase a)(pri) protein [KO:K01807] [EC:5.3.1.6]
RSc1013  putative ribokinase protein [KO:K00852] [EC:2.7.1.15]
RSc0691  putative phosphomannomutase or phosphoglucomutase protein [KO:K15778] [EC:5.4.2.8 5.4.2.2]
RSc0395  prsA; probable ribose-phosphate pyrophosphokinase protein [KO:K00948] [EC:2.7.6.1]
RSc0202  probable ribose-phosphate pyrophosphokinase protein [KO:K00948] [EC:2.7.6.1]
RSp1560  edd; probable phosphogluconate dehydratase oxidoreductase protein [KO:K01690] [EC:4.2.1.12]
RSp1190  eda; probable bifunctional alkh protein (khg/kdpg aldolase): 4-hydroxy-2-oxoglutarate aldolase and 2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
RSc0771  putative transmembrane dehydrogenase (large subunit) oxidoreductase protein [KO:K19813] [EC:1.1.5.9]
RSp0824  putative gluconolactonase (d-glucono-delta-lactone lactonohydrolase) protein [KO:K01053] [EC:3.1.1.17]
RSp0945  probable dehydrogenase oxidoreductase protein [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
RSc1034  hypothetical oxidoreductase protein [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
RSc0441  gntK; probable thermoresistant gluconokinase (gluconate kinase 2) protein [KO:K00851] [EC:2.7.1.12]
RSp0946  putative gluconate kinase protein [KO:K00851] [EC:2.7.1.12]
RSp1184  putative fructokinase-like protein (sugar kinase) [KO:K00874] [EC:2.7.1.45]
RSp1449  ttuD1; probable hydroxypyruvate reductase oxidoreductase protein [KO:K11529] [EC:2.7.1.165]
RSc0486  ttuD2; putative hydroxypyruvate reductase oxidoreductase protein [KO:K11529] [EC:2.7.1.165]
RSc0573  fbaA; probable fructose-bisphosphate aldolase protein [KO:K01624] [EC:4.1.2.13]
RSc2126  fbp; probable fructose-1,6-bisphosphatase protein [KO:K03841] [EC:3.1.3.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
rso00010  Glycolysis / Gluconeogenesis
rso00040  Pentose and glucuronate interconversions
rso00052  Galactose metabolism
rso00230  Purine metabolism
rso00240  Pyrimidine metabolism
rso00340  Histidine metabolism
rso00630  Glyoxylate and dicarboxylate metabolism
rso00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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