KEGG   PATHWAY: rti00970
Entry
rti00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Rufibacter tibetensis
Class
Genetic Information Processing; Translation
Pathway map
rti00970  Aminoacyl-tRNA biosynthesis
rti00970

Organism
Rufibacter tibetensis [GN:rti]
Gene
DC20_04255  tRNA-Ala [KO:K14218]
DC20_01700  tRNA-Ala [KO:K14218]
DC20_15700  tRNA-Ala [KO:K14218]
DC20_22220  tRNA-Ala [KO:K14218]
DC20_10455  tRNA-Ala [KO:K14218]
DC20_20975  tRNA-Arg [KO:K14219]
DC20_04175  tRNA-Arg [KO:K14219]
DC20_15535  tRNA-Arg [KO:K14219]
DC20_05605  tRNA-Arg [KO:K14219]
DC20_05730  tRNA-Asn [KO:K14220]
DC20_17590  tRNA-Asp [KO:K14221]
DC20_17565  tRNA-Asp [KO:K14221]
DC20_16925  tRNA-Cys [KO:K14222]
DC20_04475  tRNA-Gln [KO:K14223]
DC20_00145  tRNA-Glu [KO:K14224]
DC20_00550  tRNA-Glu [KO:K14224]
DC20_11525  tRNA-Gly [KO:K14225]
DC20_07280  tRNA-Gly [KO:K14225]
DC20_10790  tRNA-Gly [KO:K14225]
DC20_10385  tRNA-His [KO:K14226]
DC20_01705  tRNA-Ile [KO:K14227]
DC20_10450  tRNA-Ile [KO:K14227]
DC20_22225  tRNA-Ile [KO:K14227]
DC20_15695  tRNA-Ile [KO:K14227]
DC20_00035  tRNA-Leu [KO:K14228]
DC20_10795  tRNA-Leu [KO:K14228]
DC20_12590  tRNA-Leu [KO:K14228]
DC20_15855  tRNA-Leu [KO:K14228]
DC20_01745  tRNA-Leu [KO:K14228]
DC20_13905  tRNA-Lys [KO:K14229]
DC20_13910  tRNA-Lys [KO:K14229]
DC20_18755  tRNA-Met [KO:K14230]
DC20_15955  tRNA-Met [KO:K14230]
DC20_09405  tRNA-Met [KO:K14230]
DC20_07915  tRNA-Phe [KO:K14231]
DC20_20980  tRNA-Pro [KO:K14232]
DC20_07700  tRNA-Pro [KO:K14232]
DC20_20455  tRNA-Ser [KO:K14233]
DC20_20985  tRNA-Ser [KO:K14233]
DC20_02375  tRNA-Ser [KO:K14233]
DC20_11530  tRNA-Thr [KO:K14234]
DC20_18420  tRNA-Thr [KO:K14234]
DC20_11540  tRNA-Trp [KO:K14235]
DC20_11520  tRNA-Tyr [KO:K14236]
DC20_07590  tRNA-Val [KO:K14237]
DC20_08230  glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
DC20_10560  gatA; glutamyl-tRNA amidotransferase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
DC20_18260  gatB; glutamyl-tRNA amidotransferase [KO:K02434] [EC:6.3.5.6 6.3.5.7]
DC20_02880  glutamyl-tRNA amidotransferase [KO:K02435] [EC:6.3.5.6 6.3.5.7]
DC20_18255  alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
DC20_10750  aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
DC20_09790  asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
DC20_06820  asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
DC20_08475  glycine--tRNA ligase [KO:K01880] [EC:6.1.1.14]
DC20_18785  threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
DC20_03395  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
DC20_10580  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
DC20_04545  methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
DC20_13825  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
DC20_03700  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
DC20_17870  leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
DC20_08455  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
DC20_02560  lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
DC20_01640  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
DC20_10030  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
DC20_16745  histidyl-tRNA synthase [KO:K01892] [EC:6.1.1.21]
DC20_05725  phenylalanyl-tRNA synthetase subunit alpha [KO:K01889] [EC:6.1.1.20]
DC20_04915  phenylalanyl-tRNA synthetase subunit beta [KO:K01890] [EC:6.1.1.20]
DC20_14340  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
DC20_18695  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
DC20_21090  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
rti00250  Alanine, aspartate and glutamate metabolism
rti00260  Glycine, serine and threonine metabolism
rti00270  Cysteine and methionine metabolism
rti00290  Valine, leucine and isoleucine biosynthesis
rti00300  Lysine biosynthesis
rti00330  Arginine and proline metabolism
rti00340  Histidine metabolism
rti00380  Tryptophan metabolism
rti00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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