KEGG   PATHWAY: rto00230
Entry
rto00230                    Pathway                                
Name
Purine metabolism - Ruminococcus torques
Class
Metabolism; Nucleotide metabolism
Pathway map
rto00230  Purine metabolism
rto00230

Module
rto_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rto00230]
rto_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rto00230]
Other DBs
GO: 0006163 0042278
Organism
Ruminococcus torques [GN:rto]
Gene
RTO_17360  NTP pyrophosphohydrolases including oxidative damage repair enzymes [KO:K01515] [EC:3.6.1.13 3.6.1.-]
RTO_23410  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
RTO_29940  Phosphomannomutase [KO:K01835] [EC:5.4.2.2]
RTO_14670  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
RTO_27020  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
RTO_17210  amidophosphoribosyltransferase [KO:K00764] [EC:2.4.2.14]
RTO_05810  phosphoribosylamine--glycine ligase [KO:K01945] [EC:6.3.4.13]
RTO_05820  formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase [KO:K11175] [EC:2.1.2.2]
RTO_18040  phosphoribosylformylglycinamidine synthase [KO:K01952] [EC:6.3.5.3]
RTO_05830  phosphoribosylaminoimidazole synthetase [KO:K01933] [EC:6.3.3.1]
RTO_05840  5-(carboxyamino)imidazole ribonucleotide mutase [KO:K01588] [EC:5.4.99.18]
RTO_16160  phosphoribosylaminoimidazole-succinocarboxamide synthase [KO:K01923] [EC:6.3.2.6]
RTO_17220  adenylosuccinate lyase [KO:K01756] [EC:4.3.2.2]
RTO_29270  AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) [KO:K00602] [EC:2.1.2.3 3.5.4.10]
RTO_29260  IMP cyclohydrolase-like protein. [KO:K11176] [EC:3.5.4.10]
RTO_32430  5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [KO:K11751] [EC:3.1.3.5 3.6.1.45]
RTO_06770  5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [KO:K11751] [EC:3.1.3.5 3.6.1.45]
RTO_23420  purine nucleoside phosphorylase I, inosine and guanosine-specific [KO:K03783] [EC:2.4.2.1]
RTO_30220  hypoxanthine phosphoribosyltransferase [KO:K00760] [EC:2.4.2.8]
RTO_15710  inosine-5'-monophosphate dehydrogenase [KO:K00088] [EC:1.1.1.205]
RTO_22240  non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family [KO:K01519] [EC:3.6.1.66]
RTO_05690  xanthine phosphoribosyltransferase [KO:K03816] [EC:2.4.2.22]
RTO_10910  xanthine dehydrogenase, molybdenum binding subunit apoprotein [KO:K00087] [EC:1.17.1.4]
RTO_10920  Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [KO:K13479] [EC:1.17.1.4]
RTO_09240  Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [KO:K13479] [EC:1.17.1.4]
RTO_24190  Cytosine deaminase and related metal-dependent hydrolases [KO:K01487] [EC:3.5.4.3]
RTO_27520  guanylate kinase [KO:K00942] [EC:2.7.4.8]
RTO_23620  Guanylate kinase [KO:K00942] [EC:2.7.4.8]
RTO_26300  anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
RTO_05390  hypothetical protein [KO:K21138] [EC:3.1.7.2]
RTO_07380  (p)ppGpp synthetase, RelA/SpoT family [KO:K01139] [EC:2.7.6.5 3.1.7.2]
RTO_09410  Uncharacterized protein conserved in bacteria [KO:K07816] [EC:2.7.6.5]
RTO_07900  Uncharacterized protein conserved in bacteria [KO:K07816] [EC:2.7.6.5]
RTO_25650  adenylate cyclase [KO:K01768] [EC:4.6.1.1]
RTO_18690  adenylosuccinate synthase [KO:K01939] [EC:6.3.4.4]
RTO_23430  adenosine deaminase [KO:K01488] [EC:3.5.4.4]
RTO_09680  Adenylate kinase [KO:K00939] [EC:2.7.4.3]
RTO_06530  Carbamate kinase [KO:K00926] [EC:2.7.2.2]
RTO_24200  carbamate kinase [KO:K00926] [EC:2.7.2.2]
Compound
C00002  ATP
C00008  ADP
C00011  CO2
C00014  Ammonia
C00020  AMP
C00035  GDP
C00037  Glycine
C00039  DNA
C00044  GTP
C00046  RNA
C00048  Glyoxylate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00064  L-Glutamine
C00081  ITP
C00086  Urea
C00104  IDP
C00117  D-Ribose 5-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00130  IMP
C00131  dATP
C00144  GMP
C00147  Adenine
C00169  Carbamoyl phosphate
C00206  dADP
C00209  Oxalate
C00212  Adenosine
C00224  Adenylyl sulfate
C00242  Guanine
C00262  Hypoxanthine
C00286  dGTP
C00288  HCO3-
C00294  Inosine
C00301  ADP-ribose
C00330  Deoxyguanosine
C00360  dAMP
C00361  dGDP
C00362  dGMP
C00366  Urate
C00385  Xanthine
C00387  Guanosine
C00499  Allantoate
C00559  Deoxyadenosine
C00575  3',5'-Cyclic AMP
C00603  (S)-Ureidoglycolate
C00620  alpha-D-Ribose 1-phosphate
C00655  Xanthosine 5'-phosphate
C00700  XTP
C00802  Oxalureate
C00942  3',5'-Cyclic GMP
C01228  Guanosine 3',5'-bis(diphosphate)
C01260  P1,P4-Bis(5'-adenosyl)tetraphosphate
C01261  P1,P4-Bis(5'-guanosyl) tetraphosphate
C01344  dIDP
C01345  dITP
C01367  3'-AMP
C01444  Oxamate
C01762  Xanthosine
C02091  (S)-Ureidoglycine
C02348  (R)(-)-Allantoin
C02350  (S)-Allantoin
C02353  2',3'-Cyclic AMP
C02718  N-Formiminoglycine
C03090  5-Phosphoribosylamine
C03373  Aminoimidazole ribotide
C03483  Adenosine tetraphosphate
C03614  Inosine 5'-tetraphosphate
C03794  N6-(1,2-Dicarboxyethyl)-AMP
C03838  5'-Phosphoribosylglycinamide
C04051  5-Amino-4-imidazolecarboxyamide
C04376  5'-Phosphoribosyl-N-formylglycinamide
C04392  P1,P4-Bis(5'-xanthosyl) tetraphosphate
C04494  Guanosine 3'-diphosphate 5'-triphosphate
C04640  2-(Formamido)-N1-(5'-phosphoribosyl)acetamidine
C04677  1-(5'-Phosphoribosyl)-5-amino-4-imidazolecarboxamide
C04734  1-(5'-Phosphoribosyl)-5-formamido-4-imidazolecarboxamide
C04751  1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate
C04823  1-(5'-Phosphoribosyl)-5-amino-4-(N-succinocarboxamide)-imidazole
C05239  5-Aminoimidazole
C05512  Deoxyinosine
C05513  Urate-3-ribonucleoside
C05515  5-Ureido-4-imidazole carboxylate
C05516  5-Amino-4-imidazole carboxylate
C05993  Acetyl adenylate
C06193  Guanosine 3'-phosphate
C06194  2',3'-Cyclic GMP
C06195  Imidazolone
C06196  2'-Deoxyinosine 5'-phosphate
C06197  P1,P3-Bis(5'-adenosyl) triphosphate
C06433  5'-Benzoylphosphoadenosine
C06435  5'-Butyrylphosphoinosine
C11821  5-Hydroxyisourate
C12248  5-Hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate
C15667  5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole
C22395  N6-Succino-2-amino-2'-deoxyadenylate
C22441  dZMP
C22442  dZDP
C22443  dZTP
C22499  8-Hydroxyadenine
C22500  2,8-Dihydroxyadenine
Reference
PMID:10601204
  Authors
Cusa E, Obradors N, Baldoma L, Badia J, Aguilar J.
  Title
Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli.
  Journal
J Bacteriol 181:7479-84 (1999)
DOI:10.1128/JB.181.24.7479-7484.1999
Reference
PMID:10986234
  Authors
Xi H, Schneider BL, Reitzer L.
  Title
Purine catabolism in Escherichia coli and function of xanthine dehydrogenase in purine salvage.
  Journal
J Bacteriol 182:5332-41 (2000)
DOI:10.1128/JB.182.19.5332-5341.2000
Related
pathway
rto00030  Pentose phosphate pathway
rto00220  Arginine biosynthesis
rto00250  Alanine, aspartate and glutamate metabolism
rto00260  Glycine, serine and threonine metabolism
rto00340  Histidine metabolism
rto00630  Glyoxylate and dicarboxylate metabolism
rto00730  Thiamine metabolism
rto00740  Riboflavin metabolism
rto00790  Folate biosynthesis
KO pathway
ko00230   
LinkDB

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