KEGG   PATHWAY: rub00010
Entry
rub00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Rubrobacter tropicus
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
rub00010  Glycolysis / Gluconeogenesis
rub00010

Module
rub_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rub00010]
rub_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rub00010]
rub_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rub00010]
rub_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rub00010]
Other DBs
GO: 0006096 0006094
Organism
Rubrobacter tropicus [GN:rub]
Gene
GBA63_06735  ROK family protein [KO:K25026] [EC:2.7.1.2]
GBA63_05725  ROK family protein [KO:K25026] [EC:2.7.1.2]
GBA63_03115  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
GBA63_15410  ATP-dependent 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
GBA63_20160  ATP-dependent 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
GBA63_13635  ATP-dependent 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
GBA63_11670  fructose-bisphosphatase class II [KO:K02446] [EC:3.1.3.11]
GBA63_03415  fructose-bisphosphate aldolase class I [KO:K01623] [EC:4.1.2.13]
GBA63_08015  kbaY; tagatose-bisphosphate aldolase subunit KbaY [KO:K01624] [EC:4.1.2.13]
GBA63_08465  fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
GBA63_12820  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
GBA63_12830  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
GBA63_18820  type II glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
GBA63_12825  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
GBA63_13120  hypothetical protein [KO:K15634] [EC:5.4.2.11]
GBA63_09220  histidine phosphatase family protein [KO:K15634] [EC:5.4.2.11]
GBA63_16640  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
GBA63_06855  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
GBA63_06860  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
GBA63_20450  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
GBA63_05140  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
GBA63_05145  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
GBA63_04430  acetoin dehydrogenase dihydrolipoyllysine-residue acetyltransferase subunit [KO:K00627] [EC:2.3.1.12]
GBA63_05150  hypothetical protein [KO:K00627] [EC:2.3.1.12]
GBA63_03320  FAD-binding protein [KO:K00382] [EC:1.8.1.4]
GBA63_18815  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
GBA63_16460  alcohol dehydrogenase catalytic domain-containing protein [KO:K00121] [EC:1.1.1.284 1.1.1.1]
GBA63_01595  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
GBA63_20340  zinc-binding alcohol dehydrogenase family protein [KO:K13953] [EC:1.1.1.1]
GBA63_03540  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
GBA63_06610  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
GBA63_01750  aldose epimerase [KO:K01785] [EC:5.1.3.3]
GBA63_08710  ROK family protein [KO:K00886] [EC:2.7.1.63]
GBA63_15180  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
rub00020  Citrate cycle (TCA cycle)
rub00030  Pentose phosphate pathway
rub00500  Starch and sucrose metabolism
rub00620  Pyruvate metabolism
rub00640  Propanoate metabolism
rub00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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