KEGG   PATHWAY: scae00030
Entry
scae00030                   Pathway                                
Name
Pentose phosphate pathway - Streptomyces caniscabiei
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
scae00030  Pentose phosphate pathway
scae00030

Module
scae_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:scae00030]
scae_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:scae00030]
scae_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:scae00030]
scae_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:scae00030]
Other DBs
GO: 0006098
Organism
Streptomyces caniscabiei [GN:scae]
Gene
IHE65_34280  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
IHE65_34360  zwf; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
IHE65_06300  zwf; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
IHE65_34350  pgl; 6-phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
IHE65_44420  lactonase family protein [KO:K07404] [EC:3.1.1.31]
IHE65_03730  lactonase family protein [KO:K07404] [EC:3.1.1.31]
IHE65_22585  gnd; decarboxylating 6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
IHE65_05125  gndA; NADP-dependent phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
IHE65_06310  gnd; decarboxylating 6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
IHE65_37190  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
IHE65_28610  thiamine pyrophosphate-dependent enzyme [KO:K00615] [EC:2.2.1.1]
IHE65_28615  transketolase [KO:K00615] [EC:2.2.1.1]
IHE65_34370  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
IHE65_05565  transketolase [KO:K00615] [EC:2.2.1.1]
IHE65_07850  transketolase [KO:K00615] [EC:2.2.1.1]
IHE65_05570  transketolase [KO:K00615] [EC:2.2.1.1]
IHE65_34365  tal; transaldolase [KO:K00616] [EC:2.2.1.2]
IHE65_42990  RpiB/LacA/LacB family sugar-phosphate isomerase [KO:K01808] [EC:5.3.1.6]
IHE65_29425  ribose-5-phosphate isomerase [KO:K01808] [EC:5.3.1.6]
IHE65_01920  phosphoketolase family protein [KO:K01621] [EC:4.1.2.9 4.1.2.22]
IHE65_16385  deoC; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
IHE65_28860  ribokinase [KO:K00852] [EC:2.7.1.15]
IHE65_01970  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
IHE65_26650  ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
IHE65_03670  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
IHE65_32000  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
IHE65_44410  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
IHE65_01265  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
IHE65_35955  gluconokinase [KO:K00851] [EC:2.7.1.12]
IHE65_44415  sugar kinase [KO:K00874] [EC:2.7.1.45]
IHE65_16020  sugar kinase [KO:K00874] [EC:2.7.1.45]
IHE65_01260  sugar kinase [KO:K00874] [EC:2.7.1.45]
IHE65_41370  class II fructose-bisphosphate aldolase family protein [KO:K01624] [EC:4.1.2.13]
IHE65_20100  fbaA; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
IHE65_08690  class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
IHE65_15775  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
IHE65_38440  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
IHE65_13230  ATP-dependent 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
IHE65_33195  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
scae00010  Glycolysis / Gluconeogenesis
scae00040  Pentose and glucuronate interconversions
scae00052  Galactose metabolism
scae00230  Purine metabolism
scae00240  Pyrimidine metabolism
scae00340  Histidine metabolism
scae00630  Glyoxylate and dicarboxylate metabolism
scae00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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