KEGG   PATHWAY: sclv00630
Entry
sclv00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Styela clava (leathery sea squirt)
Class
Metabolism; Carbohydrate metabolism
Pathway map
sclv00630  Glyoxylate and dicarboxylate metabolism
sclv00630

Module
sclv_M00621  Glycine cleavage system [PATH:sclv00630]
sclv_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:sclv00630]
Other DBs
GO: 0046487 0043648
Organism
Styela clava (leathery sea squirt) [GN:sclv]
Gene
120345466  acetyl-coenzyme A synthetase 2-like, mitochondrial [KO:K01895] [EC:6.2.1.1]
120334002  acetyl-coenzyme A synthetase, cytoplasmic-like [KO:K01895] [EC:6.2.1.1]
120329060  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
120340711  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
120342033  citrate synthase, mitochondrial-like [KO:K01647] [EC:2.3.3.1]
120329409  aconitate hydratase, mitochondrial-like [KO:K01681] [EC:4.2.1.3]
120332576  cytoplasmic aconitate hydratase-like [KO:K01681] [EC:4.2.1.3]
120332324  acetyl-CoA acetyltransferase, mitochondrial-like [KO:K00626] [EC:2.3.1.9]
120340798  ethylmalonyl-CoA/methylmalonyl-CoA epimerase-like [KO:K05606] [EC:5.1.99.1]
120338678  propionyl-CoA carboxylase alpha chain, mitochondrial-like [KO:K01965] [EC:6.4.1.3]
120327791  propionyl-CoA carboxylase beta chain, mitochondrial-like [KO:K01966] [EC:6.4.1.3 2.1.3.15]
120338496  methylmalonyl-CoA mutase, mitochondrial-like [KO:K01847] [EC:5.4.99.2]
120326420  hydroxyacid oxidase 1-like [KO:K11517] [EC:1.1.3.15]
120335068  hydroxyacid oxidase 2-like [KO:K11517] [EC:1.1.3.15]
120327004  hydroxyacid oxidase 1-like isoform X1 [KO:K11517] [EC:1.1.3.15]
120336323  hydroxyacid oxidase 1-like isoform X1 [KO:K11517] [EC:1.1.3.15]
120336357  hydroxyacid oxidase 1-like [KO:K11517] [EC:1.1.3.15]
120345681  hydroxyacid oxidase 1-like [KO:K11517] [EC:1.1.3.15]
120345682  hydroxyacid oxidase 1-like [KO:K11517] [EC:1.1.3.15]
120337530  hydroxyacid oxidase 1-like isoform X1 [KO:K11517] [EC:1.1.3.15]
120330287  hydroxyacid oxidase 1-like [KO:K11517] [EC:1.1.3.15]
120338861  hydroxyacid oxidase 1-like [KO:K11517] [EC:1.1.3.15]
120347198  hydroxyacid oxidase 1-like isoform X1 [KO:K11517] [EC:1.1.3.15]
120347199  hydroxyacid oxidase 1-like isoform X1 [KO:K11517] [EC:1.1.3.15]
120347202  hydroxyacid oxidase 1-like [KO:K11517] [EC:1.1.3.15]
120347339  hydroxyacid oxidase 1-like [KO:K11517] [EC:1.1.3.15]
120347340  LOW QUALITY PROTEIN: hydroxyacid oxidase 1-like [KO:K11517] [EC:1.1.3.15]
120339176  hydroxyacid oxidase 1-like [KO:K11517] [EC:1.1.3.15]
120347954  LOW QUALITY PROTEIN: hydroxyacid oxidase 1-like [KO:K11517] [EC:1.1.3.15]
120340374  hydroxyacid oxidase 1-like [KO:K11517] [EC:1.1.3.15]
120340701  hydroxyacid oxidase 1-like [KO:K11517] [EC:1.1.3.15]
120341375  hydroxyacid oxidase 1-like [KO:K11517] [EC:1.1.3.15]
120331413  catalase-like [KO:K03781] [EC:1.11.1.6]
120332454  glyoxylate reductase/hydroxypyruvate reductase-like [KO:K00049] [EC:1.1.1.79 1.1.1.81]
120334316  glycerol-3-phosphate phosphatase-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
120328054  serine--pyruvate aminotransferase-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
120342089  glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
120336526  serine hydroxymethyltransferase, cytosolic-like [KO:K00600] [EC:2.1.2.1]
120330976  serine hydroxymethyltransferase, mitochondrial-like [KO:K00600] [EC:2.1.2.1]
120342759  LOW QUALITY PROTEIN: serine hydroxymethyltransferase, mitochondrial-like [KO:K00600] [EC:2.1.2.1]
120337378  glycine dehydrogenase (decarboxylating), mitochondrial-like [KO:K00281] [EC:1.4.4.2]
120337501  aminomethyltransferase, mitochondrial-like [KO:K00605] [EC:2.1.2.10]
120341890  LOW QUALITY PROTEIN: aminomethyltransferase, mitochondrial-like [KO:K00605] [EC:2.1.2.10]
120343184  dihydrolipoyl dehydrogenase, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
120335272  glycine cleavage system H protein-like [KO:K02437]
120335006  putative hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
120336689  glycerate kinase-like [KO:K11529] [EC:2.7.1.165]
120331743  4-hydroxy-2-oxoglutarate aldolase, mitochondrial-like [KO:K18123] [EC:4.1.3.16]
120344698  kynurenine formamidase-like [KO:K01432] [EC:3.5.1.9]
120328651  kynurenine formamidase-like [KO:K01432] [EC:3.5.1.9]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
sclv00010  Glycolysis / Gluconeogenesis
sclv00020  Citrate cycle (TCA cycle)
sclv00030  Pentose phosphate pathway
sclv00053  Ascorbate and aldarate metabolism
sclv00071  Fatty acid degradation
sclv00230  Purine metabolism
sclv00250  Alanine, aspartate and glutamate metabolism
sclv00260  Glycine, serine and threonine metabolism
sclv00620  Pyruvate metabolism
sclv00750  Vitamin B6 metabolism
sclv00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system