KEGG   PATHWAY: sel00040
Entry
sel00040                    Pathway                                
Name
Pentose and glucuronate interconversions - Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078
Class
Metabolism; Carbohydrate metabolism
Pathway map
sel00040  Pentose and glucuronate interconversions
sel00040

Module
sel_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sel00040]
Organism
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum RKS5078 [GN:sel]
Gene
SPUL_2190  ybhC; putative pectinesterase precursor [KO:K01051] [EC:3.1.1.11]
SPUL_3031  kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [KO:K01815] [EC:5.3.1.17]
SPUL_3030  kduD; 2-keto-3-deoxygluconate oxidoreductase [KO:K00065] [EC:1.1.1.127]
SPUL_3143  uronate isomerase (glucuronate isomerase) [KO:K01812] [EC:5.3.1.12]
SPUL_2311  putative hydrolase N-terminus [KO:K16849] [EC:4.2.1.7]
SPUL_2310  putative hydrolase C-terminus [KO:K16850] [EC:4.2.1.7]
SPUL_3141  D-mannonate hydrolase [KO:K01686] [EC:4.2.1.8]
SPUL_1321  rspA; starvation sensing protein RspA [KO:K08323] [EC:4.2.1.8]
SPUL_1431  putative dehydratase [KO:K08323] [EC:4.2.1.8]
SPUL_1325  ydfI; putative D-mannonate oxidoreductase [KO:K00040] [EC:1.1.1.57]
SPUL_3142  D-mannonate oxidoreductase [KO:K00040] [EC:1.1.1.57]
SPUL_1322  rspB; starvation sensing protein RspB [KO:K08322] [EC:1.1.1.380]
SPUL_0818  udg; UDP-glucose 6-dehydrogenase [KO:K00012] [EC:1.1.1.22]
SPUL_0799  galF; UTP-glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
SPUL_1566  galU; glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
SPUL_3897  yiaK; putative carboxylic acid dehydrogenase [KO:K08092] [EC:1.1.1.130]
SPUL_3891  lyxK; putative L-xylulose kinase [KO:K00880] [EC:2.7.1.53]
SPUL_4376  sgaH; putative hexulose-6-phosphate synthase [KO:K03078] [EC:4.1.1.85]
SPUL_3890  sgbH; putative hexulose-6-phosphate synthase [KO:K03078] [EC:4.1.1.85]
SPUL_4377  hypothetical protein [KO:K03079] [EC:5.1.3.22]
SPUL_3889  sgbU; putative sugar-phosphate isomerase [KO:K03079] [EC:5.1.3.22]
SPUL_4378  sgaE; putative class II aldolase [KO:K03077] [EC:5.1.3.4]
SPUL_3888  sgbE; putative sugar isomerase [KO:K03077] [EC:5.1.3.4]
SPUL_0106  araD; L-ribulose-5-phosphate 4-epimerase [KO:K03077] [EC:5.1.3.4]
SPUL_4098  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
SPUL_3583  putative ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
SPUL_0107  araA; L-arabinose isomerase [KO:K01804] [EC:5.3.1.4]
SPUL_0108  araB; L-ribulokinase [KO:K00853] [EC:2.7.1.16]
SPUL_3907  xylB; xylulose kinase [KO:K00854] [EC:2.7.1.17]
SPUL_3906  xylA; D-xylose isomerase [KO:K01805] [EC:5.3.1.5]
SPUL_3620  rhaB; rhamnulokinase [KO:K00848] [EC:2.7.1.5]
SPUL_3622  rhaD; rhamnulose-1-phosphate aldolase [KO:K01629] [EC:4.1.2.19]
SPUL_4048  putative dihydrodipicolinate synthetase [KO:K22397] [EC:4.1.2.28]
SPUL_2986  fucI; L-fuculose isomerase [KO:K01818] [EC:5.3.1.25 5.3.1.3]
SPUL_2987  fucK; L-fuculose kinase [KO:K00879] [EC:2.7.1.51]
SPUL_2983  fucA; fuculose-1-phosphate aldolase [KO:K01628] [EC:4.1.2.17]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
PMID:11741871
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
PMID:15697206
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
PMID:10572115
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
PMID:10913097
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
PMID:15901685
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
sel00010  Glycolysis / Gluconeogenesis
sel00020  Citrate cycle (TCA cycle)
sel00030  Pentose phosphate pathway
sel00052  Galactose metabolism
sel00053  Ascorbate and aldarate metabolism
sel00500  Starch and sucrose metabolism
sel00520  Amino sugar and nucleotide sugar metabolism
sel00561  Glycerolipid metabolism
sel00562  Inositol phosphate metabolism
sel00740  Riboflavin metabolism
KO pathway
ko00040   
LinkDB

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