KEGG   PATHWAY: sena00030
Entry
sena00030                   Pathway                                
Name
Pentose phosphate pathway - Salmonella enterica subsp. enterica serovar Enteritidis EC20090135
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
sena00030  Pentose phosphate pathway
sena00030

Module
sena_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:sena00030]
sena_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sena00030]
sena_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:sena00030]
sena_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:sena00030]
sena_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:sena00030]
sena_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sena00030]
Other DBs
GO: 0006098
Organism
Salmonella enterica subsp. enterica serovar Enteritidis EC20090135 [GN:sena]
Gene
AU38_20635  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
AU38_05780  glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
AU38_03800  6-phosphogluconolactonase [KO:K07404] [EC:3.1.1.31]
AU38_10495  phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) [KO:K00033] [EC:1.1.1.44 1.1.1.343]
AU38_20005  epimerase [KO:K01783] [EC:5.1.3.1]
AU38_16885  ribulose phosphate epimerase [KO:K01783] [EC:5.1.3.1]
AU38_12445  transketolase [KO:K00615] [EC:2.2.1.1]
AU38_11740  transketolase [KO:K00615] [EC:2.2.1.1]
AU38_11745  carbohydrate degradation protein [KO:K00615] [EC:2.2.1.1]
AU38_14835  transketolase [KO:K00615] [EC:2.2.1.1]
AU38_00025  transaldolase [KO:K00616] [EC:2.2.1.2]
AU38_12440  transaldolase [KO:K00616] [EC:2.2.1.2]
AU38_14770  ribose-5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
AU38_22340  2-deoxyribose-5-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
AU38_18425  ribokinase [KO:K00852] [EC:2.7.1.15]
AU38_18885  ribokinase [KO:K00852] [EC:2.7.1.15]
AU38_22350  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
AU38_03410  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
AU38_06460  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
AU38_05785  phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
AU38_05790  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
AU38_18325  4-hydroxy-2-ketovalerate aldolase [KO:K17463] [EC:4.1.2.14]
AU38_00865  glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
AU38_17715  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
AU38_17170  gntK; gluconate kinase [KO:K00851] [EC:2.7.1.12]
AU38_21855  idnK; gluconate kinase [KO:K00851] [EC:2.7.1.12]
AU38_17525  ketodeoxygluconokinase [KO:K00874] [EC:2.7.1.45]
AU38_18350  PTS fructose transporter subunit IIA [KO:K17464] [EC:2.7.1.203]
AU38_18345  PTS sugar transporter [KO:K17465] [EC:2.7.1.203]
AU38_18340  PTS sorbose transporter subunit IIC [KO:K17466]
AU38_18335  PTS fructose transporter subunit IID [KO:K17467]
AU38_18330  selenocysteine synthase [KO:K17468] [EC:4.3.1.29]
AU38_10785  fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
AU38_14795  class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
AU38_21605  fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
AU38_20030  fructose 1,6-bisphosphatase [KO:K02446] [EC:3.1.3.11]
AU38_19915  ATP-dependent 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
AU38_08890  6-phosphofructokinase [KO:K16370] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
sena00010  Glycolysis / Gluconeogenesis
sena00040  Pentose and glucuronate interconversions
sena00052  Galactose metabolism
sena00230  Purine metabolism
sena00240  Pyrimidine metabolism
sena00340  Histidine metabolism
sena00630  Glyoxylate and dicarboxylate metabolism
sena00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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